halophFGD

Basic Information

Locus ID: Ah006596

Species & Taxonomic ID: Atriplex hortensis & 34272

Genome Assembly: Atriplex hortensis v2.0

Description: Serine threonine-protein phosphatase 7 long form homolog

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Scaffold_579_HRSCAF_742	26807573	26808401	+	Ah006596

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.22	10,967.38 Da	52.83	86.81	-0.36

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF10536	Plant mobile domain	19	91	7.2E-11	IPR019557

KEGG Pathway

KO Term:

K12448 (UDP-arabinose 4-epimerase [EC:5.1.3.5])

Pathway:

ko00520 (Amino sugar and nucleotide sugar metabolism) map00520 (Amino sugar and nucleotide sugar metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways)

Reaction:

R01473 (UDP-L-arabinose <=> UDP-D-xylose)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G48120.1	hydrolases;protein serine/threonine phosphatases.
RefSeq	XP_048492828.1	serine/threonine-protein phosphatase 7 long form homolog [Beta vulgaris subsp. vulgaris]
Swiss-Prot	Q9LNG5	Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1
TrEMBL	A0A438DDB5	Serine/threonine-protein phosphatase 7 long form-like OS=Vitis vinifera OX=29760 GN=MAIL3_139 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Aizoaceae	Mesembryanthemum crystallinum	3	gene_22859, gene_3677, gene_6214
Amaranthaceae	Atriplex hortensis	3	Ah006596, Ah026904, Ah033066
Amaranthaceae	Salicornia bigelovii	69	Sbi_jg10574, Sbi_jg13161, Sbi_jg14289, Sbi_jg1461, Sbi_jg387 ... Sbi_jg14856, Sbi_jg15414, Sbi_jg15892, Sbi_jg16038, Sbi_jg16039, Sbi_jg17017, Sbi_jg17794, Sbi_jg18859, Sbi_jg20587, Sbi_jg20588, Sbi_jg20867, Sbi_jg21189, Sbi_jg21625, Sbi_jg21647, Sbi_jg24890, Sbi_jg25766, Sbi_jg25953, Sbi_jg2664, Sbi_jg27245, Sbi_jg27641, Sbi_jg28233, Sbi_jg28910, Sbi_jg28911, Sbi_jg29061, Sbi_jg29112, Sbi_jg29611, Sbi_jg31906, Sbi_jg32112, Sbi_jg33156, Sbi_jg33231, Sbi_jg35307, Sbi_jg36910, Sbi_jg36911, Sbi_jg37659, Sbi_jg37848, Sbi_jg38014, Sbi_jg38932, Sbi_jg39378, Sbi_jg42150, Sbi_jg44837, Sbi_jg45166, Sbi_jg47353, Sbi_jg48179, Sbi_jg48916, Sbi_jg49321, Sbi_jg49402, Sbi_jg49989, Sbi_jg51529, Sbi_jg52012, Sbi_jg52446, Sbi_jg53066, Sbi_jg58931, Sbi_jg59606, Sbi_jg59607, Sbi_jg59648, Sbi_jg59926, Sbi_jg61368, Sbi_jg6157, Sbi_jg62907, Sbi_jg62959, Sbi_jg62967, Sbi_jg6306, Sbi_jg63114, Sbi_jg9987
Amaranthaceae	Salicornia europaea	2	Seu_jg15751, Seu_jg21945
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00026342
Apiaceae	Apium graveolens	1	Ag9G00627
Plumbaginaceae	Limonium bicolor	2	Lb2G10686, Lb3G16601
Poaceae	Oryza coarctata	2	Oco13G014430, Oco16G012190
Solanaceae	Lycium barbarum	3	gene-LOC132599869, gene-LOC132609715, gene-LOC132622063
Solanaceae	Solanum chilense	2	SOLCI003030300, SOLCI005764100
Solanaceae	Solanum pennellii	3	gene-LOC114074771, gene-LOC114075281, gene-LOC114078436