Basic Information
Locus ID:
Ah006185
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Short Name:
NEK1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_579_HRSCAF_742 | 15510262 | 15519889 | - | Ah006185 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.23 | 68,455.24 Da | 50.12 | 74.88 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 3 | 258 | 1.59007E-136 | - |
| Pfam | PF00069 | Protein kinase domain | 4 | 257 | 2.0E-64 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 259 | 8.5E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 83 | 2.3E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 87 | 320 | 3.3E-57 | - |
| SMART | SM00220 | serkin_6 | 4 | 258 | 3.9E-82 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 4 | 258 | 46.350346 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 125 | 137 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 10 | 33 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 513 | 543 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 403 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 365 | 403 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 517 | 534 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04810.1 | NIMA-related kinase 2. Encodes AtNek2, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_021773177.1 | serine/threonine-protein kinase Nek3-like [Chenopodium quinoa] | 0 |
| Q9CAU7 | Serine/threonine-protein kinase Nek2 OS=Arabidopsis thaliana OX=3702 GN=NEK2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RYR2 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_013760 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology