Basic Information
Locus ID:
Ah006130
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Short Name:
IAA16
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_579_HRSCAF_742 | 14417687 | 14421521 | - | Ah006130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.25 | 30,688.13 Da | 25.98 | 65.75 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 17 | 276 | 2.6E-89 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 158 | 266 | 1.86E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 161 | 279 | 1.2E-43 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 167 | 267 | 24.300613 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 129 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 108 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_021773140.1 | auxin-responsive protein IAA16-like [Chenopodium quinoa] | 0 |
| O24407 | Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QK79 | Auxin-responsive protein OS=Spinacia oleracea OX=3562 GN=SOVF_169970 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology