Basic Information
Locus ID:
Ah005597
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_579_HRSCAF_742 | 7984182 | 7988166 | - | Ah005597 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 106,275.83 Da | 34.62 | 102.09 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 75 | 132 | 9.5E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 546 | 588 | 9.6E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 69 | 7.5E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 481 | 540 | 1.8E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 293 | 348 | 2.7E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 708 | 884 | 7.6E-36 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 59 | 306 | 1.02E-52 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 232 | 585 | 1.73E-70 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 706 | 937 | 7.96E-54 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 381 | 621 | 1.6E-64 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 279 | 380 | 5.5E-30 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 178 | 278 | 1.2E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 177 | 8.2E-39 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 700 | 785 | 4.8E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 885 | 952 | 2.1E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 786 | 884 | 1.2E-27 | - |
| SMART | SM00369 | LRR_typ_2 | 503 | 526 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 119 | 143 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 287 | 310 | 56.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 191 | 213 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 456 | 479 | 320.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 335 | 359 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 551 | 574 | 47.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 95 | 118 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 215 | 238 | 51.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 431 | 455 | 11.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 706 | 960 | 4.2E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 706 | 969 | 30.81708 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 712 | 736 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 835 | 847 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_021772712.1 | MDIS1-interacting receptor like kinase 1-like [Chenopodium quinoa] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KNM5 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology