Basic Information
Locus ID:
Ah005495
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_579_HRSCAF_742 | 6817930 | 6819432 | - | Ah005495 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 56,957.97 Da | 42.41 | 99.98 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14144 | Seed dormancy control | 261 | 344 | 1.9E-25 | IPR025422 |
| Pfam | PF14144 | Seed dormancy control | 30 | 94 | 1.7E-16 | IPR025422 |
| ProSiteProfiles | PS51806 | DOG1 domain profile. | 243 | 497 | 31.11463 | IPR025422 |
| ProSiteProfiles | PS51806 | DOG1 domain profile. | 1 | 224 | 21.146269 | IPR025422 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 221 | 240 | - | - |
| Coils | Coil | Coil | 254 | 274 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14880.2 | 0 | |
| RefSeq | XP_021772623.1 | protein DOG1-like 1 [Chenopodium quinoa] | 0 |
| Q58FV0 | Protein DOG1-like 3 OS=Arabidopsis thaliana OX=3702 GN=DOGL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803KNE1 | DOG1 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology