Basic Information
Locus ID:
Ah005493
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_579_HRSCAF_742 | 6809502 | 6815931 | - | Ah005493 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 97,266.32 Da | 43.47 | 96.26 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14144 | Seed dormancy control | 383 | 467 | 5.8E-25 | IPR025422 |
| Pfam | PF14144 | Seed dormancy control | 612 | 695 | 1.9E-23 | IPR025422 |
| Pfam | PF14144 | Seed dormancy control | 165 | 248 | 1.3E-25 | IPR025422 |
| ProSiteProfiles | PS51806 | DOG1 domain profile. | 1 | 132 | 12.678476 | IPR025422 |
| ProSiteProfiles | PS51806 | DOG1 domain profile. | 594 | 852 | 30.957346 | IPR025422 |
| ProSiteProfiles | PS51806 | DOG1 domain profile. | 147 | 396 | 29.707582 | IPR025422 |
| ProSiteProfiles | PS51806 | DOG1 domain profile. | 394 | 598 | 18.051615 | IPR025422 |
| Coils | Coil | Coil | 158 | 178 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14880.2 | 0 | |
| RefSeq | XP_021734855.1 | protein DOG1-like 1 [Chenopodium quinoa] | 0 |
| Q9SN45 | Protein DOG1-like 2 OS=Arabidopsis thaliana OX=3702 GN=DOGL2 PE=4 SV=2 | 0 | |
| TrEMBL | A0A803L4W0 | DOG1 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology