Basic Information
Locus ID:
Ah005482
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
protein serine/threonine kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_579_HRSCAF_742 | 6579388 | 6584719 | + | Ah005482 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.50 | 23,365.99 Da | 51.53 | 97.84 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 26 | 122 | 3.4E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 12 | 186 | 6.41E-32 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 124 | 203 | 3.8E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 6 | 123 | 1.3E-27 | - |
| SMART | SM00220 | serkin_6 | 16 | 163 | 3.5E-11 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 16 | 204 | 15.100073 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01090.1 | SNF1 kinase homolog 10. encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase | 0 |
| RefSeq | XP_034208607.1 | SNF1-related protein kinase catalytic subunit alpha KIN10 isoform X3 [Prunus dulcis] | 0 |
| Q38997 | SNF1-related protein kinase catalytic subunit alpha KIN10 OS=Arabidopsis thaliana OX=3702 GN=KIN10 PE=1 SV=3 | 0 | |
| TrEMBL | A0A803KNC9 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah005482 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl47994, Sgl53349, Sgl58611 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.4AG0005760 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_01.1023.V1.1, AsparagusV1_01.2635.V1.1 ... |
| Brassicaceae | Schrenkiella parvula | 1 | SpUn0683_0010.v2.2 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00011914 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0320830.1 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr06G016290 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3BG078850 |
| Poaceae | Zea mays | 1 | Zm00001eb107770_P001 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-13837, nbis-gene-269, nbis-gene-36809 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-4878 |
| Salicaceae | Populus euphratica | 1 | populus_peu09382 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC114076934 |