Basic Information
Locus ID:
Ah004890
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Casein Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_579_HRSCAF_742 | 627607 | 635751 | + | Ah004890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.28 | 81,362.35 Da | 43.11 | 70.23 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14016 | STKc_CK1 | 160 | 433 | 2.75636E-130 | - |
| Pfam | PF00069 | Protein kinase domain | 161 | 445 | 3.8E-18 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 161 | 441 | 5.74E-60 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 131 | 453 | 1.4E-81 | - |
| SMART | SM00220 | serkin_6 | 161 | 456 | 6.7E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 161 | 443 | 23.594606 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 167 | 196 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 284 | 296 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 109 | 126 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 99 | 126 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 39 | 81 | - | - |
| Coils | Coil | Coil | 102 | 122 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13670.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_021728854.1 | casein kinase 1-like protein HD16 [Chenopodium quinoa] | 0 |
| Q852L0 | Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KLY0 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology