Basic Information
Locus ID:
Ah004747
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_552_HRSCAF_710 | 112236254 | 112242651 | + | Ah004747 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.17 | 79,975.53 Da | 36.11 | 96.19 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 205 | 472 | 1.2921E-93 | - |
| Pfam | PF00069 | Protein kinase domain | 570 | 710 | 3.4E-26 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 202 | 470 | 3.0E-48 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 552 | 716 | 9.98E-48 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 185 | 493 | 9.04E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 275 | 485 | 1.3E-57 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 645 | 716 | 7.1E-19 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 532 | 644 | 9.1E-36 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 161 | 274 | 4.7E-39 | - |
| SMART | SM00220 | serkin_6 | 199 | 476 | 6.4E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 569 | 716 | 25.488562 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 199 | 476 | 37.149113 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 205 | 227 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 575 | 597 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 320 | 332 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 673 | 685 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_021855872.1 | uncharacterized protein LOC110795196 [Spinacia oleracea] | 0 |
| Q8GYA4 | Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3 | 0 | |
| TrEMBL | A0A803N3P3 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 5 | gene_14840, gene_14842, gene_14844, gene_14845, gene_14847 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah004747 |
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg8167, Sbi_jg8168, Sbi_jg8169 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg11849, Seu_jg11851 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00001510 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl51604, Sgl51605, Sgl56893 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.5AG0000600 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG17.192 |