HalophFGD

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Basic Information
Locus ID: Ah004715
Species & Taxonomic ID: Atriplex hortensis & 34272
Genome Assembly: Atriplex hortensis v2.0
Description: amine oxidase
Maps and Mapping Data
Chromosome Start End Strand ID
Scaffold_552_HRSCAF_710 111954380 111957685 + Ah004715
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.41 77,077.19 Da 37.46 80.09 -0.31
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF02727 Copper amine oxidase, N2 domain 67 147 9.5E-19 IPR015800
Pfam PF01179 Copper amine oxidase, enzyme domain 284 631 6.5E-104 IPR015798
Pfam PF02728 Copper amine oxidase, N3 domain 159 258 2.1E-23 IPR015802
SUPERFAMILY SSF49998 Amine oxidase catalytic domain 274 674 1.7E-133 IPR036460
SUPERFAMILY SSF54416 Amine oxidase N-terminal region 157 266 2.4E-31 IPR016182
SUPERFAMILY SSF54416 Amine oxidase N-terminal region 64 148 1.1E-17 IPR016182
Gene3D G3DSA:2.70.98.20 Copper amine oxidase, catalytic domain 632 684 1.4E-12 IPR036460
Gene3D G3DSA:3.10.450.40 - 160 250 1.2E-26 -
Gene3D G3DSA:2.70.98.20 Copper amine oxidase, catalytic domain 251 631 9.2E-122 IPR036460
Gene3D G3DSA:3.10.450.40 - 65 159 1.4E-18 -
ProSitePatterns PS01164 Copper amine oxidase topaquinone signature. 440 453 - IPR000269
Gene Ontology
Biological Process:
GO:0009308 (amine metabolic process)
Molecular Function:
GO:0005507 (copper ion binding) GO:0008131 (primary methylamine oxidase activity) GO:0048038 (quinone binding)
KEGG Pathway
KO Term:
K00276 (primary-amine oxidase [EC:1.4.3.21])
Pathway:
ko00260 (Glycine, serine and threonine metabolism) map00260 (Glycine, serine and threonine metabolism) ko00350 (Tyrosine metabolism) map00350 (Tyrosine metabolism) ko00360 (Phenylalanine metabolism) map00360 (Phenylalanine metabolism) ko00410 (beta-Alanine metabolism) map00410 (beta-Alanine metabolism) ko00950 (Isoquinoline alkaloid biosynthesis) map00950 (Isoquinoline alkaloid biosynthesis) ko00960 (Tropane, piperidine and pyridine alkaloid biosynthesis) map00960 (Tropane, piperidine and pyridine alkaloid biosynthesis) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites)
Reaction:
R02382 (Tyramine + H2O + Oxygen <=> 4-Hydroxyphenylacetaldehyde + Ammonia + Hydrogen peroxide) R02529 (Aminoacetone + H2O + Oxygen <=> Methylglyoxal + Ammonia + Hydrogen peroxide) R02613 (Phenethylamine + Oxygen + H2O <=> Phenylacetaldehyde + Ammonia + Hydrogen peroxide) R03139 (1,3-Diaminopropane + Oxygen + H2O <=> 3-Aminopropanal + Ammonia + Hydrogen peroxide) R04027 (N-Methylputrescine + Oxygen + H+ <=> 1-Methylpyrrolinium + Hydrogen peroxide + Ammonia) R04300 (Dopamine + H2O + Oxygen <=> 3,4-Dihydroxyphenylacetaldehyde + Ammonia + Hydrogen peroxide) R06154 (Methylamine + Oxygen + H2O <=> Formaldehyde + Ammonia + Hydrogen peroxide) R06740 (Cadaverine + H2O + Oxygen <=> 5-Aminopentanal + Ammonia + Hydrogen peroxide)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G12290.1 Copper amine oxidase family protein. 0
RefSeq XP_021768398.1 primary amine oxidase-like [Chenopodium quinoa] 0
Swiss-Prot Q8H1H9 Amine oxidase [copper-containing] gamma 1 OS=Arabidopsis thaliana OX=3702 GN=CuAOgamma1 PE=1 SV=1 0
TrEMBL A0A803L6G0 Amine oxidase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 7 jg12557, jg23376, jg27588, jg27899, jg27901, jg37223 ...
jg37224
Aizoaceae Mesembryanthemum crystallinum 2 gene_14835, gene_15551
Amaranthaceae Atriplex hortensis 4 Ah004711, Ah004715, Ah011665, Ah020336
Amaranthaceae Beta vulgaris 5 BVRB_5g098280, BVRB_5g098290, BVRB_5g098350, BVRB_5g098370 ...
BVRB_5g108020
Amaranthaceae Salicornia bigelovii 8 Sbi_jg31372, Sbi_jg4867, Sbi_jg4872, Sbi_jg57907, Sbi_jg6998 ...
Sbi_jg57908, Sbi_jg7229, Sbi_jg7230
Amaranthaceae Salicornia europaea 4 Seu_jg12778, Seu_jg12779, Seu_jg13104, Seu_jg25539
Amaranthaceae Suaeda aralocaspica 8 GOSA_00001478, GOSA_00001479, GOSA_00001480, GOSA_00001481 ...
GOSA_00001486, GOSA_00001487, GOSA_00003955, GOSA_00003956
Amaranthaceae Suaeda glauca 16 Sgl00133, Sgl00137, Sgl00281, Sgl00287, Sgl05195, Sgl05337 ...
Sgl05343, Sgl18224, Sgl51632, Sgl51633, Sgl51642, Sgl56936, Sgl56937, Sgl56938, Sgl56945, Sgl56946
Amaranthaceae Chenopodium album 10 gene:ENSEOMG00000007109, gene:ENSEOMG00000013615 ...
gene:ENSEOMG00000013798, gene:ENSEOMG00000020876, gene:ENSEOMG00000022059, gene:ENSEOMG00000024552, gene:ENSEOMG00000030867, gene:ENSEOMG00000037412, gene:ENSEOMG00000046903, gene:ENSEOMG00000050257
Amaranthaceae Chenopodium quinoa 7 CQ.Regalona.r1.3AG0015250, CQ.Regalona.r1.3BG0014590 ...
CQ.Regalona.r1.5AG0000730, CQ.Regalona.r1.5BG0000860, CQ.Regalona.r1.5BG0000920, CQ.Regalona.r1.9AG0010050, CQ.Regalona.r1.9BG0012380
Anacardiaceae Pistacia vera 5 pistato.v30143350, pistato.v30143370, pistato.v30191620 ...
pistato.v30236890, pistato.v30236910
Apiaceae Apium graveolens 4 Ag6G01755, Ag8G01597, Ag9G02437, Ag9G02438
Arecaceae Cocos nucifera 5 COCNU_06G014360, COCNU_07G001890, COCNU_14G012350 ...
COCNU_14G012360, COCNU_14G012370
Arecaceae Phoenix dactylifera 1 gene-LOC103706132
Asparagaceae Asparagus officinalis 3 AsparagusV1_01.1268.V1.1, AsparagusV1_03.1540.V1.1 ...
AsparagusV1_10.124.V1.1
Asteraceae Flaveria trinervia 2 Ftri15G25881, Ftri7G33144
Brassicaceae Arabidopsis thaliana 9 AT1G31670.1, AT1G31690.1, AT1G31710.1, AT1G62810.1 ...
AT3G43670.1, AT4G12270.1, AT4G12280.1, AT4G12290.1, AT4G14940.1
Brassicaceae Eutrema salsugineum 5 Thhalv10006982m.g.v1.0, Thhalv10007005m.g.v1.0 ...
Thhalv10023306m.g.v1.0, Thhalv10024636m.g.v1.0, Thhalv10028460m.g.v1.0
Brassicaceae Schrenkiella parvula 4 Sp1g27360.v2.2, Sp2g01790.v2.2, Sp6g05290.v2.2 ...
Sp7g13090.v2.2
Brassicaceae Brassica nigra 9 BniB01g032540.2N, BniB01g032550.2N, BniB02g058720.2N ...
BniB05g021160.2N, BniB05g056570.2N, BniB05g056590.2N, BniB07g018960.2N, BniB07g019010.2N, BniB07g019020.2N
Casuarinaceae Casuarina equisetifolia 5 Ceq03G0141, Ceq03G0145, Ceq09G1332, Ceq09G1339, Ceq09G1340
Casuarinaceae Casuarina glauca 7 Cgl03G0159, Cgl03G0163, Cgl03G0172, Cgl09G1422, Cgl09G1428 ...
Cgl09G1429, Cgl09G1430
Cymodoceaceae Cymodocea nodosa 2 gene.Cymno06g11650, gene.Cymno18g02970
Hydrocharitaceae Thalassia testudinum 4 gene.Thate02g03650, gene.Thate02g07180, gene.Thate02g23120 ...
gene.Thate02g37610
Malvaceae Hibiscus hamabo Siebold & Zucc. 2 nbisL1-mrna-4973, nbisL1-mrna-5425
Nitrariaceae Nitraria sibirica 8 evm.TU.LG10.1253, evm.TU.LG11.1048, evm.TU.LG11.1050 ...
evm.TU.LG11.1052, evm.TU.LG11.1053, evm.TU.LG11.1054, evm.TU.LG11.1055, evm.TU.LG11.1056
Plantaginaceae Plantago ovata 4 Pov_00004232, Pov_00004236, Pov_00022685, Pov_00026221
Plumbaginaceae Limonium bicolor 4 Lb2G08954, Lb2G08955, Lb2G08956, Lb2G08962
Poaceae Echinochloa crus-galli 17 AH03.3407, AH03.3409, AH03.3410, AH03.759, AH03.807, AH08.47 ...
AH09.407, BH03.3638, BH03.3639, BH03.3640, BH03.894, BH03.930, BH07.2377, CH03.1004, CH03.1059, CH03.3836, CH07.2454
Poaceae Eleusine coracana subsp. coracana 7 gene-QOZ80_4AG0323880, gene-QOZ80_4BG0354440 ...
gene-QOZ80_7AG0562390, gene-QOZ80_7AG0573670, gene-QOZ80_7BG0588850, gene-QOZ80_7BG0593540, gene-QOZ80_7BG0604960
Poaceae Hordeum vulgare 3 HORVU.MOREX.r3.2HG0106870.1, HORVU.MOREX.r3.4HG0403000.1 ...
HORVU.MOREX.r3.4HG0403010.1
Poaceae Lolium multiflorum 10 gene-QYE76_030432, gene-QYE76_037523, gene-QYE76_038470 ...
gene-QYE76_038471, gene-QYE76_040144, gene-QYE76_040146, gene-QYE76_040195, gene-QYE76_040206, gene-QYE76_040558, gene-QYE76_048127
Poaceae Oryza coarctata 5 Oco07G002130, Oco07G002170, Oco12G009660, Oco13G010580 ...
Oco14G011280
Poaceae Oryza sativa 4 LOC_Os04g20164.1, LOC_Os06g23114.1, LOC_Os06g23140.1 ...
LOC_Os12g27110.1
Poaceae Paspalum vaginatum 5 gene-BS78_02G115000, gene-BS78_02G115100, gene-BS78_K230200 ...
gene-BS78_02G322300, gene-BS78_02G322400
Poaceae Puccinellia tenuiflora 5 Pt_Chr0304502, Pt_Chr0304582, Pt_Chr0304584, Pt_Chr0304586 ...
Pt_Chr0305534
Poaceae Sporobolus alterniflorus 3 Chr24G010730, Chr26G003080, Chr28G009940
Poaceae Thinopyrum elongatum 2 Tel2E01G167800, Tel4E01G474900
Poaceae Triticum dicoccoides 4 gene_TRIDC2AG008460, gene_TRIDC2BG010180 ...
gene_TRIDC4AG002880, gene_TRIDC4BG048750
Poaceae Triticum aestivum 6 TraesCS2A02G076300.1, TraesCS2B02G091300.1 ...
TraesCS2D02G075000.1, TraesCS4A02G020900.1, TraesCS4B02G282700.1, TraesCS4D02G281700.1
Poaceae Zea mays 2 Zm00001eb107350_P001, Zm00001eb420190_P001
Poaceae Zoysia japonica 3 nbis-gene-27649, nbis-gene-52772, nbis-gene-631
Poaceae Zoysia macrostachya 3 Zma_g19383, Zma_g4996, Zma_g6695
Portulacaceae Portulaca oleracea 11 evm.TU.LG05.2210, evm.TU.LG05.2211, evm.TU.LG10.220 ...
evm.TU.LG10.223, evm.TU.LG10.224, evm.TU.LG10.225, evm.TU.LG10.227, evm.TU.LG17.212, evm.TU.LG17.215, evm.TU.LG17.216, evm.TU.LG17.218
Posidoniaceae Posidonia oceanica 1 gene.Posoc07g06940
Rhizophoraceae Bruguiera sexangula 5 evm.TU.Scaffold_16_RagTag.284, evm.TU.Scaffold_16_RagTag.285 ...
evm.TU.Scaffold_3_RagTag.448, evm.TU.Scaffold_3_RagTag.449, evm.TU.Scaffold_3_RagTag.450
Rhizophoraceae Carallia pectinifolia 7 nbisL1-mrna-1468, nbisL1-mrna-1469, nbisL1-mrna-1470 ...
nbisL1-mrna-22520, nbisL1-mrna-22521, nbisL1-mrna-31011, nbisL1-mrna-31012
Rhizophoraceae Ceriops tagal 5 nbisL1-mrna-5210, nbisL1-mrna-5211, nbisL1-mrna-6484 ...
nbisL1-mrna-6485, nbisL1-mrna-6486
Rhizophoraceae Ceriops zippeliana 6 nbisL1-mrna-20239, nbisL1-mrna-6178, nbisL1-mrna-6179 ...
nbisL1-mrna-6180, nbisL1-mrna-6181, nbisL1-mrna-6182
Rhizophoraceae Kandelia candel 5 add.evm.TU.utg000019l.393, evm.TU.utg000019l.949 ...
evm.TU.utg000019l.950, evm.TU.utg000022l.320, evm.TU.utg000022l.321
Rhizophoraceae Kandelia obovata 4 Maker00012751, Maker00012803, Maker00014370, Maker00014379
Rhizophoraceae Rhizophora apiculata 5 nbisL1-mrna-18129, nbisL1-mrna-3461, nbisL1-mrna-3462 ...
nbisL1-mrna-6348, nbisL1-mrna-6349
Rhizophoraceae Rhizophora mangle 5 nbisL1-mrna-2118, nbisL1-mrna-2119, nbisL1-mrna-6592 ...
nbisL1-mrna-6593, nbisL1-mrna-6594
Salicaceae Populus euphratica 6 populus_peu03428, populus_peu03429, populus_peu07374 ...
populus_peu21373, populus_peu21374, populus_peu21375
Solanaceae Lycium barbarum 5 gene-LOC132611042, gene-LOC132611043, gene-LOC132618551 ...
gene-LOC132635052, gene-LOC132636385
Solanaceae Solanum chilense 3 SOLCI000977800, SOLCI002989600, SOLCI003526200
Solanaceae Solanum pennellii 4 gene-LOC107012994, gene-LOC107028398, gene-LOC107030442 ...
gene-LOC107030611
Tamaricaceae Reaumuria soongarica 2 STRG.24031_chr05_-, gene_9347
Tamaricaceae Tamarix chinensis 1 TC01G2883
Zosteraceae Zostera marina 1 Zosma02g06220.v3.1
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