Basic Information
Locus ID:
Ah004613
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_552_HRSCAF_710 | 110935264 | 110936652 | + | Ah004613 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.36 | 50,391.22 Da | 41.81 | 89.39 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18316 | BTB_POZ_KCTD-like | 17 | 95 | 2.73816E-16 | - |
| Pfam | PF02214 | BTB/POZ domain | 17 | 103 | 1.2E-14 | IPR003131 |
| SUPERFAMILY | SSF54695 | POZ domain | 14 | 102 | 5.1E-17 | IPR011333 |
| SUPERFAMILY | SSF50969 | YVTN repeat-like/Quinoprotein amine dehydrogenase | 127 | 351 | 2.75E-11 | IPR011044 |
| Gene3D | G3DSA:2.130.10.10 | - | 125 | 461 | 8.4E-8 | IPR015943 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 4 | 110 | 7.8E-22 | IPR011333 |
| SMART | SM00225 | BTB_4 | 15 | 113 | 8.6E-7 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 15 | 80 | 8.896306 | IPR000210 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41330.1 | BTB/POZ domain with WD40/YVTN repeat-like protein. | 0 |
| RefSeq | XP_021754183.1 | BTB/POZ domain-containing protein At5g41330-like [Chenopodium quinoa] | 0 |
| Q9FN67 | BTB/POZ domain-containing protein At5g41330 OS=Arabidopsis thaliana OX=3702 GN=At5g41330 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LQF7 | BTB domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology