Basic Information
Locus ID:
Ah004231
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_552_HRSCAF_710 | 106885584 | 106891693 | - | Ah004231 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 124,325.89 Da | 48.58 | 66.24 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 305 | 391 | 1.7096E-31 | - |
| Pfam | PF00855 | PWWP domain | 305 | 392 | 2.0E-20 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 305 | 408 | 2.05E-28 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 295 | 402 | 2.8E-27 | - |
| SMART | SM00293 | PWWP_4 | 305 | 366 | 3.6E-12 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 307 | 368 | 13.817114 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 803 | 828 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 253 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1046 | 1089 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 519 | 541 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 626 | 640 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 912 | 934 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 114 | 138 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 936 | 954 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 803 | 839 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 579 | 625 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 114 | 135 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 257 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 564 | 707 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 519 | 535 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 893 | 959 | - | - |
| Coils | Coil | Coil | 1117 | 1137 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40340.2 | - | 0 |
| RefSeq | XP_021768148.1 | uncharacterized protein LOC110732506 isoform X2 [Chenopodium quinoa] | 0 |
| Q9FNE4 | PWWP domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PDP3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LU53 | PWWP domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology