Basic Information
Locus ID:
Ah003987
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_552_HRSCAF_710 | 103950662 | 103951777 | + | Ah003987 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.89 | 41,236.98 Da | 61.00 | 101.38 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 193 | 235 | 3.3E-8 | IPR011598 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 67 | 159 | 2.3E-14 | IPR025610 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 188 | 261 | 2.22E-15 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 187 | 262 | 2.0E-14 | IPR036638 |
| SMART | SM00353 | finulus | 192 | 241 | 2.4E-12 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 186 | 235 | 14.690826 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 169 | 197 | - | - |
| Coils | Coil | Coil | 232 | 252 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00870.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein. | 0 |
| RefSeq | XP_021768500.1 | transcription factor bHLH14-like [Chenopodium quinoa] | 0 |
| O23090 | Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LWS2 | BHLH domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology