Basic Information
Locus ID:
Ah003892
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Short Name:
CBL04
Description:
calcineurin b-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_552_HRSCAF_710 | 102925624 | 102927087 | - | Ah003892 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.62 | 15,978.33 Da | 22.93 | 112.00 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13202 | EF hand | 79 | 102 | 1.3E-4 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 4 | 117 | 8.97E-16 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 57 | 133 | 1.1E-16 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 4 | 56 | 3.8E-7 | - |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 73 | 108 | 9.659605 | IPR002048 |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
ko04010 (MAPK signaling pathway)
map04010 (MAPK signaling pathway)
ko04020 (Calcium signaling pathway)
map04020 (Calcium signaling pathway)
ko04022 (cGMP-PKG signaling pathway)
map04022 (cGMP-PKG signaling pathway)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04218 (Cellular senescence)
map04218 (Cellular senescence)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04370 (VEGF signaling pathway)
map04370 (VEGF signaling pathway)
map04650 (Natural killer cell mediated cytotoxicity)
map04658 (Th1 and Th2 cell differentiation)
map04659 (Th17 cell differentiation)
map04660 (T cell receptor signaling pathway)
map04662 (B cell receptor signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24270.5 | - | 0 |
| RefSeq | XP_021846641.1 | calcineurin B-like protein 8 isoform X5 [Spinacia oleracea] | 0 |
| O81223 | Calcineurin B-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=CBL4 PE=1 SV=3 | 0 | |
| TrEMBL | A0A0K9QRJ4 | Calcineurin B-like protein OS=Spinacia oleracea OX=3562 GN=SOVF_149110 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology