Basic Information
Locus ID:
Ah003807
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
thaumatin-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_552_HRSCAF_710 | 101955631 | 101955975 | + | Ah003807 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.69 | 12,084.82 Da | 19.14 | 77.98 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00314 | Thaumatin family | 33 | 113 | 5.5E-15 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 26 | 113 | 2.09E-27 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 26 | 114 | 6.3E-27 | IPR037176 |
| SMART | SM00205 | tha2 | 29 | 114 | 8.9E-8 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 114 | 1.7E-24 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 26 | 114 | 18.86216 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 82 | 111 | 8.7E-24 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 47 | 56 | 8.7E-24 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 28 | 40 | 8.7E-24 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 69 | 80 | 8.7E-24 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 0 |
| RefSeq | XP_021754122.1 | alpha-amylase/trypsin inhibitor-like [Chenopodium quinoa] | 0 |
| P81370 | Thaumatin-like protein OS=Actinidia deliciosa OX=3627 GN=tlp PE=1 SV=2 | 0 | |
| TrEMBL | A0A803LQN6 | Thaumatin-like protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology