Basic Information
Locus ID:
Ah003784
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Dual specificity protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_552_HRSCAF_710 | 101624442 | 101631092 | + | Ah003784 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.32 | 77,013.27 Da | 45.12 | 78.32 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 422 | 668 | 3.64609E-124 | - |
| CDD | cd00130 | PAS | 98 | 187 | 2.54801E-10 | IPR000014 |
| Pfam | PF00989 | PAS fold | 79 | 183 | 1.5E-10 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 416 | 667 | 2.3E-64 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 410 | 678 | 1.12E-79 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 79 | 187 | 5.23E-16 | IPR035965 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 495 | 679 | 1.5E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 409 | 493 | 9.2E-27 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 73 | 190 | 1.3E-18 | - |
| SMART | SM00220 | serkin_6 | 416 | 672 | 4.8E-57 | IPR000719 |
| SMART | SM00091 | pas_2 | 77 | 144 | 5.6E-6 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 80 | 187 | 1.5E-12 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 75 | 146 | 11.970475 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 416 | 671 | 42.124279 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 422 | 443 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 535 | 547 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 576 | 586 | 2.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 639 | 661 | 2.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 595 | 617 | 2.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 529 | 547 | 2.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 490 | 503 | 2.1E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 285 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 281 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 359 | 406 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 377 | 406 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 335 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23050.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_021754142.1 | probable tyrosine-protein kinase DDB_G0283397 [Chenopodium quinoa] | 0 |
| Q9FPR3 | Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana OX=3702 GN=EDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LQQ4 | Serine/threonine-protein kinase CTR1 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology