Basic Information
Locus ID:
Ah003555
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_552_HRSCAF_710 | 97311303 | 97323958 | + | Ah003555 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 75,782.74 Da | 37.82 | 100.06 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 71 | 3.4E-8 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 196 | 213 | 1.8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 423 | 684 | 5.4E-39 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 123 | 182 | 1.1E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 240 | 3.0E-41 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 400 | 685 | 1.99E-55 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 314 | 1.6E-56 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 499 | 690 | 8.4E-41 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 392 | 497 | 1.4E-26 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 419 | 691 | 29.446081 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 425 | 447 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22730.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021753979.1 | somatic embryogenesis receptor kinase 2-like [Chenopodium quinoa] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803LR13 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology