Basic Information
Locus ID:
Ah003492
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_552_HRSCAF_710 | 96098861 | 96102966 | + | Ah003492 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.65 | 65,599.85 Da | 29.69 | 102.61 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 11 | 46 | 1.7E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 9 | 52 | 2.62E-10 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 134 | 342 | 1.96E-10 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 4 | 49 | 2.2E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 119 | 395 | 9.8E-11 | IPR032675 |
| SMART | SM00256 | fbox_2 | 15 | 54 | 0.0091 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 9 | 55 | 10.451268 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59190.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_021755129.1 | F-box/FBD/LRR-repeat protein At5g56420-like [Chenopodium quinoa] | 0 |
| Q1PED9 | F-box/LRR-repeat protein At3g59190 OS=Arabidopsis thaliana OX=3702 GN=At3g59190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803M4E2 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology