Basic Information
Locus ID:
Ah003064
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Lymphoid organ expressed yellow head virus receptor protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_552_HRSCAF_710 | 83232368 | 83237893 | - | Ah003064 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.38 | 52,466.99 Da | 51.64 | 65.54 | -0.87 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 270 | 353 | 1.4E-25 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 273 | 320 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 412 | 443 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 387 | 405 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 444 | 472 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 472 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 99 | 227 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 258 | - | - |
| Coils | Coil | Coil | 427 | 447 | - | - |
| Coils | Coil | Coil | 281 | 315 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021769564.1 | protein WVD2-like 4 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803MJV6 | TPX2 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology