Basic Information
Locus ID:
Ah001679
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_552_HRSCAF_710 | 25243434 | 25253294 | + | Ah001679 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.82 | 14,584.85 Da | 52.97 | 86.15 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 6 | 81 | 2.39324E-38 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 6 | 101 | 9.5E-37 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 2 | 97 | 1.17E-24 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 100 | 8.1E-42 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 7 | 73 | 8.916236 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24990.1 | Ubiquitin family protein. geranylgeranylated protein ATGP4 | 0 |
| RefSeq | XP_021737438.1 | membrane-anchored ubiquitin-fold protein 3-like isoform X1 [Chenopodium quinoa] | 0 |
| Q9SW27 | Membrane-anchored ubiquitin-fold protein 3 OS=Arabidopsis thaliana OX=3702 GN=MUB3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RVX1 | Membrane-anchored ubiquitin-fold protein OS=Spinacia oleracea OX=3562 GN=SOVF_021950 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology