Basic Information
Locus ID:
Ah001139
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_552_HRSCAF_710 | 12383612 | 12386620 | - | Ah001139 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.56 | 26,035.44 Da | 31.10 | 70.96 | -0.57 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021734161.1 | F-box/kelch-repeat protein At3g23880-like [Chenopodium quinoa] | 0 |
| TrEMBL | A0A5B7BYL5 | Putative F-box protein CPR30-like OS=Davidia involucrata OX=16924 GN=Din_042995 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 7 | gene_13562, gene_18928, gene_18929, gene_19416, gene_4730 ... |
| Amaranthaceae | Atriplex hortensis | 7 | Ah000401, Ah001137, Ah001139, Ah014368, Ah028400, Ah028402 ... |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg30749, Sbi_jg58515 |
| Amaranthaceae | Salicornia europaea | 5 | Seu_jg20870, Seu_jg28387, Seu_jg28388, Seu_jg28403 ... |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000010129 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.5BG0023560, CQ.Regalona.r1.8BG0020740 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG02.1040, evm.TU.LG09.933 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132644015 |