Basic Information
Locus ID:
Ah000966
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_552_HRSCAF_710 | 9869450 | 9872915 | + | Ah000966 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 29,963.94 Da | 47.57 | 80.61 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14299 | Phloem protein 2 | 107 | 259 | 7.1E-24 | IPR025886 |
| Pfam | PF00646 | F-box domain | 9 | 54 | 7.8E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 67 | 3.53E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 103 | 2.0E-6 | - |
| SMART | SM00256 | fbox_2 | 13 | 53 | 1.7E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 7 | 53 | 11.458055 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02360.1 | phloem protein 2-B10. | 0 |
| RefSeq | XP_021850976.1 | putative F-box protein PP2-B12 [Spinacia oleracea] | 0 |
| Q9FLU7 | Putative F-box protein PP2-B12 OS=Arabidopsis thaliana OX=3702 GN=PP2B12 PE=4 SV=1 | 0 | |
| TrEMBL | A0A0K9RW88 | F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_021320 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.