Basic Information
Locus ID:
Ah000942
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_552_HRSCAF_710 | 9536525 | 9538808 | - | Ah000942 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.71 | 14,206.08 Da | 67.87 | 89.76 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 24 | 118 | 9.70064E-51 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 22 | 117 | 2.4E-38 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 23 | 123 | 9.31E-43 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 6 | 125 | 1.2E-46 | IPR016135 |
| SMART | SM00212 | ubc_7 | 9 | 123 | 1.2E-34 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 1 | 123 | 40.974556 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 50 | 65 | - | IPR023313 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02760.1 | ubiquiting-conjugating enzyme 2. ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene. | 0 |
| RefSeq | XP_021733796.1 | ubiquitin-conjugating enzyme E2 2-like [Chenopodium quinoa] | 0 |
| P25866 | Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum OX=4565 GN=UBC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067H565 | UBC core domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g031839mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology