Basic Information
Locus ID:
Ah000823
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
11S globulin seed storage protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_552_HRSCAF_710 | 8147775 | 8158497 | + | Ah000823 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 37,178.36 Da | 36.60 | 89.77 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02243 | cupin_11S_legumin_C | 185 | 340 | 4.80284E-60 | - |
| Pfam | PF00190 | Cupin | 11 | 144 | 2.4E-9 | IPR006045 |
| Pfam | PF00190 | Cupin | 188 | 323 | 1.2E-12 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 14 | 330 | 3.26E-28 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 13 | 168 | 2.7E-23 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 182 | 342 | 3.7E-38 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 7 | 146 | 8.2E-9 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 184 | 326 | 2.4E-5 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 245 | 261 | 1.7E-5 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 263 | 278 | 1.7E-5 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 303 | 320 | 1.7E-5 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 281 | 299 | 1.7E-5 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G07750.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_021761604.1 | glutelin type-A 3-like [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803L997 | Cupin type-1 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology