Basic Information
Locus ID:
Ah000666
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
f-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_552_HRSCAF_710 | 6489730 | 6490929 | + | Ah000666 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.47 | 46,626.17 Da | 33.20 | 87.09 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07734 | F-box associated | 238 | 366 | 4.4E-9 | IPR006527 |
| Pfam | PF00646 | F-box domain | 4 | 39 | 9.4E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 1 | 76 | 1.31E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 78 | 1.2E-7 | - |
| SMART | SM00256 | fbox_2 | 5 | 45 | 3.2E-8 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 126 | 341 | 2.1E-22 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 1 | 45 | 12.862258 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33290.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_021719053.1 | putative F-box protein At3g16210 [Chenopodium quinoa] | 0 |
| Q9SZA6 | F-box/kelch-repeat protein At4g33290 OS=Arabidopsis thaliana OX=3702 GN=At4g33290 PE=4 SV=3 | 0 | |
| TrEMBL | A0A0K9QZQ7 | SRP54 domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_123090 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.