Basic Information
Locus ID:
Ah000393
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
F-box associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_552_HRSCAF_710 | 3865921 | 3867180 | - | Ah000393 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 47,085.62 Da | 39.31 | 85.78 | -0.25 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12560.1 | F-box and associated interaction domains-containing protein. Encodes CPR30 (Constitutive Expresser of PR Genes 30), a F-Box protein that functions as a negative regulator of defense response. | 0 |
| RefSeq | XP_048500434.1 | F-box protein CPR1 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A0K9S2W9 | F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_000730 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 13 | Ah000393, Ah000394, Ah000399, Ah003949, Ah003953, Ah003954 ... |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_4g071880, BVRB_5g113260 |
| Amaranthaceae | Salicornia bigelovii | 5 | Sbi_jg11627, Sbi_jg45701, Sbi_jg46774, Sbi_jg46778 ... |
| Amaranthaceae | Salicornia europaea | 4 | Seu_jg10869, Seu_jg18452, Seu_jg20876, Seu_jg20880 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00001449, GOSA_00014071 |
| Amaranthaceae | Suaeda glauca | 6 | Sgl33340, Sgl38687, Sgl45685, Sgl50446, Sgl67624, Sgl67625 |
| Amaranthaceae | Chenopodium album | 8 | gene:ENSEOMG00000006113, gene:ENSEOMG00000027208 ... |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.4BG0011210, CQ.Regalona.r1.4BG0011390 ... |