Basic Information
Locus ID:
Ah000102
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
PAPA-1-like family protein zinc finger (HIT type) family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_552_HRSCAF_710 | 837508 | 848732 | + | Ah000102 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.44 | 63,880.84 Da | 58.92 | 44.20 | -1.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04438 | HIT zinc finger | 535 | 566 | 2.2E-7 | IPR007529 |
| Pfam | PF04795 | PAPA-1-like conserved region | 436 | 520 | 5.2E-18 | IPR006880 |
| SMART | SM01406 | PAPA_1_2 | 435 | 520 | 2.0E-21 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 59 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 324 | 338 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 320 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 88 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 353 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 426 | 494 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 231 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 494 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 290 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 168 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 364 | 392 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 188 | 203 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 108 | 122 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 204 | 219 | - | - |
| Coils | Coil | Coil | 424 | 466 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47350.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_021768735.1 | uncharacterized protein LOC110733032 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803M7H6 | PAPA-1 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology