halophFGD

Basic Information

Locus ID: AgUnG01294

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: KIP1-like protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
ctg7186	5678	9470	+	AgUnG01294

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.08	121,533.18 Da	50.39	87.65	-0.61

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07765	KIP1-like protein	14	87	9.0E-39	IPR011684
Gene3D	G3DSA:1.10.287.1490	-	340	501	1.8E-5	-
ProSiteProfiles	PS51774	Networked (NET) actin-binding (NAB) domain profile.	13	93	51.86203	IPR011684
Coils	Coil	Coil	806	840	-	-
Coils	Coil	Coil	210	246	-	-
Coils	Coil	Coil	610	648	-	-
Coils	Coil	Coil	725	780	-	-
Coils	Coil	Coil	429	449	-	-
Coils	Coil	Coil	662	682	-	-
Coils	Coil	Coil	275	309	-	-
Coils	Coil	Coil	540	588	-	-
Coils	Coil	Coil	317	337	-	-
Coils	Coil	Coil	387	414	-	-
Coils	Coil	Coil	690	710	-	-
Coils	Coil	Coil	457	477	-	-

Gene Ontology

Molecular Function:

GO:0003779 (actin binding)

KEGG Pathway

KO Term:

K20478 (golgin subfamily B member 1)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G14760.1	kinase interacting (KIP1-like) family protein.
RefSeq	XP_017217611.1	PREDICTED: protein NETWORKED 1A-like [Daucus carota subsp. sativus]
Swiss-Prot	F4JIF4	Protein NETWORKED 1B OS=Arabidopsis thaliana OX=3702 GN=NET1B PE=2 SV=1
TrEMBL	A0A6L5BAR5	NAB domain-containing protein OS=Apium graveolens OX=4045 GN=AG4045_014566 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	2.142311	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	1.341892	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	1.565171	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	2.626118	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	1.958697	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	0.725628	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	0.922841	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	0.172783	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	10.722094	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	10.210048	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	11.677783	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	7.667664	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	9.105049	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	5.846268	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	0.587022	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	0.757025	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	0.305838	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	0.936732	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	0.473336	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	1.578757	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	1.291364	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	0.330243	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	0.276907	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	0.239072	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	0.233673	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	1.977612	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	0.916903	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	0.804183	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	1.157214	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	0		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	0.024786		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	0.002824		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	0.022334		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	0.073784		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	0.051615		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	0		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	0		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	0.002894		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	2.117697	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	1.070798	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	0.165887	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	0.077609	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	0.150459	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	0.149686	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	0.177468	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	0.044998	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	0.46935	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	0.384098	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	0.540363	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	0.31912	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	11	jg11153, jg12593, jg27868, jg35332, jg35342, jg35343, jg5755 ... jg8768, jg8769, jg8772, jg8773
Aizoaceae	Mesembryanthemum crystallinum	2	gene_13546, gene_15535
Amaranthaceae	Atriplex hortensis	1	Ah000337
Amaranthaceae	Beta vulgaris	1	BVRB_5g119750
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg30762, Sbi_jg51788, Sbi_jg5526, Sbi_jg58496
Amaranthaceae	Salicornia europaea	2	Seu_jg13373, Seu_jg28368
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00004942, GOSA_00020301
Amaranthaceae	Suaeda glauca	4	Sgl04432, Sgl09503, Sgl53769, Sgl59033
Amaranthaceae	Chenopodium album	7	gene:ENSEOMG00000005319, gene:ENSEOMG00000007845 ... gene:ENSEOMG00000009846, gene:ENSEOMG00000022748, gene:ENSEOMG00000023186, gene:ENSEOMG00000029781, gene:ENSEOMG00000045649
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.3AG0014870, CQ.Regalona.r1.3BG0015130 ... CQ.Regalona.r1.5AG0025140, CQ.Regalona.r1.5BG0026650
Anacardiaceae	Pistacia vera	3	pistato.v30026780, pistato.v30109790, pistato.v30236420
Apiaceae	Apium graveolens	7	Ag10G00717, Ag11G04090, Ag1G01840, Ag5G02517, Ag5G02518 ... AgUnG01294, AgUnG01477
Arecaceae	Cocos nucifera	4	COCNU_03G001360, COCNU_06G015610, COCNU_08G000860 ... COCNU_14G011460
Arecaceae	Phoenix dactylifera	4	gene-LOC103704582, gene-LOC103707334, gene-LOC103718097 ... gene-LOC103723807
Asparagaceae	Asparagus officinalis	2	AsparagusV1_03.531.V1.1, AsparagusV1_08.1877.V1.1
Asteraceae	Flaveria trinervia	3	Ftri11G13138, Ftri12G25254, Ftri12G33378
Brassicaceae	Arabidopsis thaliana	4	AT1G03080.1, AT3G22790.1, AT4G02710.1, AT4G14760.1
Brassicaceae	Eutrema salsugineum	4	Thhalv10006534m.g.v1.0, Thhalv10019883m.g.v1.0 ... Thhalv10024203m.g.v1.0, Thhalv10028372m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp1g02080.v2.2, Sp3g20490.v2.2, Sp7g12890.v2.2
Brassicaceae	Brassica nigra	10	BniB01g027290.2N, BniB01g039680.2N, BniB02g001100.2N ... BniB03g038510.2N, BniB03g038530.2N, BniB03g038540.2N, BniB03g038550.2N, BniB05g021330.2N, BniB07g049070.2N, BniB08g045350.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq06G2085, Ceq07G0329
Casuarinaceae	Casuarina glauca	2	Cgl06G2199, Cgl07G0337
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno01g00940, gene.Cymno06g13390
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate02g15190, gene.Thate02g28540, gene.Thate08g10660
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-6316, nbisL1-mrna-9674
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG04.1125, evm.TU.LG11.989
Plantaginaceae	Plantago ovata	2	Pov_00025927, Pov_00035226
Plumbaginaceae	Limonium bicolor	6	Lb1G08038, Lb1G08042, Lb2G10338, Lb3G18430, Lb5G28932 ... Lb5G28933
Poaceae	Echinochloa crus-galli	9	AH01.1224, AH01.1883, AH05.3993, BH01.1499, BH01.2356 ... BH05.4083, CH01.2440, CH05.4302, CH06.2621
Poaceae	Eleusine coracana subsp. coracana	6	gene-QOZ80_2AG0124930, gene-QOZ80_2BG0180530 ... gene-QOZ80_3AG0224770, gene-QOZ80_3BG0270020, gene-QOZ80_5AG0397180, gene-QOZ80_5BG0445670
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.1HG0037250.1, HORVU.MOREX.r3.4HG0402000.1 ... HORVU.MOREX.r3.5HG0432280.1, HORVU.MOREX.r3.5HG0508870.1
Poaceae	Lolium multiflorum	7	gene-QYE76_000759, gene-QYE76_045157, gene-QYE76_045227 ... gene-QYE76_063492, gene-QYE76_070585, gene-QYE76_070611, gene-QYE76_070612
Poaceae	Oryza coarctata	8	Oco05G003510, Oco05G018670, Oco06G003570, Oco06G019450 ... Oco19G004480, Oco20G004450, Oco23G010040, Oco24G009790
Poaceae	Oryza sativa	4	LOC_Os03g06510.1, LOC_Os03g43684.1, LOC_Os10g28610.1 ... LOC_Os12g41200.1
Poaceae	Paspalum vaginatum	3	gene-BS78_01G147100, gene-BS78_01G230700 ... gene-BS78_08G138700
Poaceae	Puccinellia tenuiflora	4	Pt_Chr0101211, Pt_Chr0104459, Pt_Chr0502410, Pt_Chr0704322
Poaceae	Sporobolus alterniflorus	12	Chr01G009710, Chr04G018690, Chr04G024700, Chr06G014010 ... Chr06G019480, Chr07G023480, Chr09G009440, Chr12G027310, Chr13G015630, Chr15G014790, Chr19G007950, Chr27G008700
Poaceae	Thinopyrum elongatum	4	Tel1E01G259400, Tel4E01G464400, Tel5E01G119900 ... Tel5E01G600300
Poaceae	Triticum dicoccoides	8	gene_TRIDC1AG020790, gene_TRIDC1BG024500 ... gene_TRIDC4AG003970, gene_TRIDC4BG047750, gene_TRIDC5AG008260, gene_TRIDC5AG055200, gene_TRIDC5BG010210, gene_TRIDC5BG059210
Poaceae	Triticum aestivum	12	TraesCS1A02G138400.1, TraesCS1B02G152200.2 ... TraesCS1D02G135200.2, TraesCS4A02G029000.1, TraesCS4B02G276800.2, TraesCS4D02G275400.1, TraesCS5A02G054300.1, TraesCS5A02G377100.1, TraesCS5B02G062100.1, TraesCS5B02G380700.1, TraesCS5D02G065600.1, TraesCS5D02G387100.1
Poaceae	Zea mays	7	Zm00001eb031290_P001, Zm00001eb047830_P003 ... Zm00001eb050880_P001, Zm00001eb135720_P002, Zm00001eb222880_P001, Zm00001eb222900_P001, Zm00001eb222910_P001
Poaceae	Zoysia japonica	4	nbis-gene-28005, nbis-gene-39648, nbis-gene-44566 ... nbis-gene-47555
Poaceae	Zoysia macrostachya	5	Zma_g13268, Zma_g16063, Zma_g25304, Zma_g26097, Zma_g899
Portulacaceae	Portulaca oleracea	6	evm.TU.LG01.2325, evm.TU.LG02.1105, evm.TU.LG03.2120 ... evm.TU.LG06.1785, evm.TU.LG09.870, evm.TU.LG11.1138
Posidoniaceae	Posidonia oceanica	1	gene.Posoc03g01970
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_3_RagTag.412, evm.TU.Scaffold_5_RagTag.1016 ... evm.TU.Scaffold_6_RagTag.780, evm.TU.Scaffold_9_RagTag.939
Rhizophoraceae	Carallia pectinifolia	4	nbisL1-mrna-11331, nbisL1-mrna-1508, nbisL1-mrna-15916 ... nbisL1-mrna-21270
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-16770, nbisL1-mrna-18846, nbisL1-mrna-19887 ... nbisL1-mrna-7033
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-10365, nbisL1-mrna-18373, nbisL1-mrna-6148 ... nbisL1-mrna-653
Rhizophoraceae	Kandelia candel	4	evm.TU.utg000003l.510, evm.TU.utg000006l.324 ... evm.TU.utg000011l.476, evm.TU.utg000019l.973
Rhizophoraceae	Kandelia obovata	4	Maker00007956, Maker00009159, Maker00012917, Maker00013550
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-1497, nbisL1-mrna-15291, nbisL1-mrna-9964
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-3503, nbisL1-mrna-3504, nbisL1-mrna-5117 ... nbisL1-mrna-7637
Salicaceae	Populus euphratica	10	populus_peu07415, populus_peu15077, populus_peu15078 ... populus_peu15079, populus_peu15080, populus_peu21426, populus_peu21427, populus_peu21428, populus_peu21429, populus_peu32739
Solanaceae	Lycium barbarum	3	gene-LOC132610256, gene-LOC132610825, gene-LOC132635420
Solanaceae	Solanum chilense	3	SOLCI002373800, SOLCI005846500, SOLCI006862000
Solanaceae	Solanum pennellii	3	gene-LOC107001225, gene-LOC107030912, gene-LOC107030962
Tamaricaceae	Reaumuria soongarica	3	STRG.2243_chr01_-, STRG.4016_chr02_+, gene_16425
Tamaricaceae	Tamarix chinensis	4	TC01G0823, TC02G0203, TC07G2651, TC12G1370
Zosteraceae	Zostera marina	3	Zosma04g00410.v3.1, Zosma05g28500.v3.1, Zosma06g26440.v3.1