Basic Information
Locus ID:
AgUnG01232
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
Belongs to the cysteine synthase cystathionine beta- synthase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ctg6624 | 52643 | 52813 | + | AgUnG01232 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.01 | 6,476.58 Da | 33.01 | 112.81 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF53686 | Tryptophan synthase beta subunit-like PLP-dependent enzymes | 7 | 53 | 3.04E-5 | IPR036052 |
| Gene3D | G3DSA:3.40.50.1100 | - | 8 | 54 | 3.9E-7 | IPR036052 |
KEGG Pathway
Pathway:
ko00270 (Cysteine and methionine metabolism)
map00270 (Cysteine and methionine metabolism)
ko00920 (Sulfur metabolism)
map00920 (Sulfur metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01120 (Microbial metabolism in diverse environments)
map01120 (Microbial metabolism in diverse environments)
ko01200 (Carbon metabolism)
map01200 (Carbon metabolism)
ko01230 (Biosynthesis of amino acids)
map01230 (Biosynthesis of amino acids)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04940.1 | cysteine synthase D1. Encodes cysteine synthase CysD1. | 0 |
| RefSeq | XP_017235586.1 | PREDICTED: cysteine synthase-like [Daucus carota subsp. sativus] | 0 |
| Q9S6Z7 | Bifunctional L-3-cyanoalanine synthase/cysteine synthase D1 OS=Arabidopsis thaliana OX=3702 GN=CYSD1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6L5BCJ5 | Glycosyltransferase (Fragment) OS=Apium graveolens OX=4045 GN=AG4045_008709 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|
Orthology