Basic Information
Locus ID:
AgUnG00472
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
G-quadruplex DNA unwinding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ctg3322 | 116831 | 119016 | + | AgUnG00472 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.64 | 28,107.83 Da | 49.72 | 85.93 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50249 | Nucleic acid-binding proteins | 133 | 207 | 3.08E-6 | IPR012340 |
| Gene3D | G3DSA:2.40.50.140 | - | 127 | 224 | 4.7E-14 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 220 | 253 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 220 | 247 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_017239624.1 | PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like [Daucus carota subsp. sativus] | 0 |
| TrEMBL | A0A6L5BAT6 | Rep_fac-A_C domain-containing protein OS=Apium graveolens OX=4045 GN=AG4045_007087 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 35 | Ag10G00978, Ag10G02928, Ag11G04457, Ag11G04458, Ag11G04459 ... |