halophFGD

Basic Information

Locus ID: Ag9G02199

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: Mad3/BUB1 hoMad3/BUB1 homology region 1

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr9	261011889	261017231	+	Ag9G02199

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.54	60,807.19 Da	41.05	80.34	-0.34

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	229	446	6.2E-14	IPR000719
Pfam	PF08311	Mad3/BUB1 homology region 1	10	122	5.1E-25	IPR013212
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	221	503	8.2E-32	IPR011009
Gene3D	G3DSA:1.25.40.430	-	5	161	6.1E-39	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	223	527	4.8E-96	-
SMART	SM00777	mad3_bub1_i	4	122	2.1E-10	IPR013212
SMART	SM00220	serkin_6	226	494	9.2E-10	IPR000719
ProSiteProfiles	PS51489	BUB1 N-terminal domain profile.	3	164	34.078171	IPR013212
ProSiteProfiles	PS50011	Protein kinase domain profile.	226	528	17.573523	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	347	359	-	IPR008271

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K02178 (checkpoint serine/threonine-protein kinase [EC:2.7.11.1])

Pathway:

ko04110 (Cell cycle) map04110 (Cell cycle) ko04111 (Cell cycle - yeast) map04111 (Cell cycle - yeast) ko04113 (Meiosis - yeast) map04113 (Meiosis - yeast) ko04114 (Oocyte meiosis) map04114 (Oocyte meiosis)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G20635.1	ATP binding;protein kinases;protein serine/threonine kinases.
RefSeq	XP_017255349.1	PREDICTED: mitotic checkpoint serine/threonine-protein kinase BUB1 [Daucus carota subsp. sativus]
Swiss-Prot	F4IVI0	Mitotic checkpoint serine/threonine-protein kinase BUB1 OS=Arabidopsis thaliana OX=3702 GN=BUB1 PE=1 SV=1
TrEMBL	A0A161ZU09	Mitotic checkpoint serine/threonine-protein kinase BUB1 OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_021253 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	4.981561	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	1.992661	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	1.23402	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	1.146017	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	1.357615	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	0.976099	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	0.60989	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	0.778205	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	20.615704	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	19.627647	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	22.605022	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	19.343212	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	14.428411	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	12.827793	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	0.739932	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	2.007218	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	3.9884	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	1.843025	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	2.172662	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	2.23922	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	2.359636	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	5.57023	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	7.380725	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	7.721995	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	5.501505	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	4.412366	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	5.37263	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	2.571073	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	5.164504	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	0.329255		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	0.748407		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	0.679698		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	0.562259		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	8.126431		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	0.897273		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	0.958907		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	0.563127		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	0.650634		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	5.663136	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	0.413505	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	0.408136	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	0.44508	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	0.658317	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	1.20005	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	1.064882	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	0.561329	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	1.829997	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	15.131263	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	20.675003	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	15.700686	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	1	jg19492
Aizoaceae	Mesembryanthemum crystallinum	1	gene_25917
Amaranthaceae	Atriplex hortensis	1	Ah012059
Amaranthaceae	Beta vulgaris	1	BVRB_9g205190
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg11770, Sbi_jg46643
Amaranthaceae	Salicornia europaea	1	Seu_jg20999
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00025049
Amaranthaceae	Suaeda glauca	3	Sgl79965, Sgl82398, Sgl82411
Amaranthaceae	Chenopodium album	3	gene:ENSEOMG00000018931, gene:ENSEOMG00000038970 ... gene:ENSEOMG00000052135
Amaranthaceae	Chenopodium quinoa	1	CQ.Regalona.r1.9BG0014450
Anacardiaceae	Pistacia vera	1	pistato.v30020070
Apiaceae	Apium graveolens	1	Ag9G02199
Arecaceae	Cocos nucifera	1	COCNU_06G012230
Arecaceae	Phoenix dactylifera	2	gene-LOC103707190, gene-LOC113462720
Asparagaceae	Asparagus officinalis	1	AsparagusV1_03.1158.V1.1
Asteraceae	Flaveria trinervia	1	Ftri4G23441
Brassicaceae	Arabidopsis thaliana	1	AT2G20635.1
Brassicaceae	Eutrema salsugineum	1	Thhalv10001957m.g.v1.0
Brassicaceae	Schrenkiella parvula	1	Sp3g33890.v2.2
Brassicaceae	Brassica nigra	1	BniB02g016490.2N
Casuarinaceae	Casuarina equisetifolia	1	Ceq02G2654
Casuarinaceae	Casuarina glauca	1	Cgl02G2741
Cymodoceaceae	Cymodocea nodosa	1	gene.Cymno02g14990
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate07g19530
Nitrariaceae	Nitraria sibirica	1	evm.TU.LG04.1809
Plantaginaceae	Plantago ovata	1	Pov_00008522
Plumbaginaceae	Limonium bicolor	3	Lb3G19393, Lb3G20298, Lb4G24268
Poaceae	Echinochloa crus-galli	3	AH03.3114, BH03.3296, CH03.3481
Poaceae	Eleusine coracana subsp. coracana	2	gene-QOZ80_7AG0568650, gene-QOZ80_7BG0599960
Poaceae	Hordeum vulgare	1	HORVU.MOREX.r3.2HG0142450.1
Poaceae	Lolium multiflorum	1	gene-QYE76_041123
Poaceae	Oryza coarctata	2	Oco13G008270, Oco14G008730
Poaceae	Oryza sativa	2	LOC_Os06g19420.1, LOC_Os07g32480.1
Poaceae	Paspalum vaginatum	1	gene-BS78_02G288800
Poaceae	Puccinellia tenuiflora	2	Pt_Chr0304162, Pt_Chr0405482
Poaceae	Sporobolus alterniflorus	4	Chr19G005860, Chr24G008240, Chr27G011450, Chr28G007560
Poaceae	Thinopyrum elongatum	1	Tel2E01G419700
Poaceae	Triticum dicoccoides	2	gene_TRIDC2AG030220, gene_TRIDC2BG033900
Poaceae	Triticum aestivum	2	TraesCS2A02G226000.1, TraesCS2B02G249400.1
Poaceae	Zea mays	1	Zm00001eb322380_P004
Poaceae	Zoysia japonica	1	nbis-gene-38352
Poaceae	Zoysia macrostachya	1	Zma_g5212
Portulacaceae	Portulaca oleracea	2	evm.TU.LG18.732, evm.TU.LG26.296
Posidoniaceae	Posidonia oceanica	1	gene.Posoc04g19910
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-11854, nbisL1-mrna-29738
Rhizophoraceae	Ceriops tagal	1	nbisL1-mrna-5376
Rhizophoraceae	Ceriops zippeliana	1	nbisL1-mrna-11117
Rhizophoraceae	Kandelia candel	1	evm.TU.utg000006l.788
Rhizophoraceae	Rhizophora apiculata	1	nbisL1-mrna-10309
Rhizophoraceae	Rhizophora mangle	1	nbisL1-mrna-7155
Salicaceae	Populus euphratica	1	populus_peu22507
Solanaceae	Lycium barbarum	1	gene-LOC132618642
Solanaceae	Solanum chilense	1	SOLCI003300700
Solanaceae	Solanum pennellii	1	gene-LOC107024434
Tamaricaceae	Reaumuria soongarica	1	gene_16787
Tamaricaceae	Tamarix chinensis	1	TC03G1510
Zosteraceae	Zostera marina	1	Zosma04g27030.v3.1