halophFGD

Basic Information

Locus ID: Ag9G02125

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: EKC KEOPS complex subunit

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr9	256790870	256793380	+	Ag9G02125

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.46	25,314.04 Da	34.82	90.97	-0.25

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00180	PKc	17	160	4.79471E-10	-
Pfam	PF00069	Protein kinase domain	49	161	7.9E-10	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	15	174	3.24E-23	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	103	223	1.8E-34	-
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	20	92	6.8E-27	-
SMART	SM00220	serkin_6	9	225	0.0022	IPR000719
TIGRFAM	TIGR03724	arch_bud32: Kae1-associated kinase Bud32	15	220	1.4E-59	IPR022495
ProSiteProfiles	PS50011	Protein kinase domain profile.	9	226	12.612489	IPR000719

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0004674 (protein serine/threonine kinase activity) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K08851 (TP53 regulating kinase and related kinases [EC:2.7.11.1])

Best hit

Source	Best Hit ID	Description
TAIR	AT5G26110.1	Protein kinase superfamily protein.
RefSeq	XP_017233777.1	PREDICTED: TP53-regulating kinase-like [Daucus carota subsp. sativus]
Swiss-Prot	Q96S44	EKC/KEOPS complex subunit TP53RK OS=Homo sapiens OX=9606 GN=TP53RK PE=1 SV=2
TrEMBL	A0A166HBU8	non-specific serine/threonine protein kinase OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_002713 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	20.155745	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	15.145521	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	11.788298	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	11.903623	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	11.878894	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	14.605619	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	10.076082	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	8.518214	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	38.177967	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	43.264393	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	37.353695	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	40.487545	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	41.364983	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	40.705334	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	14.620212	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	16.132334	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	16.627613	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	11.437644	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	19.004332	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	19.539904	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	13.403755	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	28.307781	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	27.864803	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	27.05559	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	26.278582	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	17.92359	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	16.579189	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	16.8407	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	16.819778	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	15.942612		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	21.73056		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	21.949581		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	21.82712		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	28.229706		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	23.152418		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	14.445095		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	12.414945		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	14.279001		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	22.801165	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	14.966865	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	14.713678	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	14.517362	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	19.891632	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	36.235973	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	28.242651	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	21.579134	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	19.330988	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	39.23122	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	39.925697	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	35.559071	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	2	jg10484, jg35329
Aizoaceae	Mesembryanthemum crystallinum	1	gene_12037
Amaranthaceae	Atriplex hortensis	1	Ah000342
Amaranthaceae	Beta vulgaris	1	BVRB_5g119680
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg28893, Sbi_jg3047
Amaranthaceae	Salicornia europaea	1	Seu_jg6855
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00000912, GOSA_00000913
Amaranthaceae	Suaeda glauca	3	Sgl11706, Sgl11866, Sgl16999
Amaranthaceae	Chenopodium album	3	gene:ENSEOMG00000005775, gene:ENSEOMG00000021230 ... gene:ENSEOMG00000022596
Amaranthaceae	Chenopodium quinoa	2	CQ.Regalona.r1.5BG0026580, CQ.Regalona.r1.8AG0003340
Anacardiaceae	Pistacia vera	1	pistato.v30026860
Apiaceae	Apium graveolens	2	Ag10G00718, Ag9G02125
Arecaceae	Cocos nucifera	1	COCNU_08G001050
Arecaceae	Phoenix dactylifera	1	gene-LOC103723805
Asteraceae	Flaveria trinervia	1	Ftri11G09166
Brassicaceae	Arabidopsis thaliana	2	AT1G08120.1, AT5G26110.1
Brassicaceae	Eutrema salsugineum	1	Thhalv10004885m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp2g21620.v2.2, Sp5g00290.v2.2
Brassicaceae	Brassica nigra	2	BniB02g008050.2N, BniB02g078430.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq03G0319, Ceq06G2088
Casuarinaceae	Casuarina glauca	1	Cgl06G2201
Cymodoceaceae	Cymodocea nodosa	1	gene.Cymno01g00870
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate02g28580
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-6313
Nitrariaceae	Nitraria sibirica	3	evm.TU.LG06.1531, evm.TU.LG06.1534, evm.TU.LG06.1535
Plantaginaceae	Plantago ovata	2	Pov_00007540, Pov_00007919
Plumbaginaceae	Limonium bicolor	3	Lb2G12749, Lb2G12789, Lb7G32702
Poaceae	Echinochloa crus-galli	3	AH01.1882, BH01.2357, CH01.2442
Poaceae	Eleusine coracana subsp. coracana	1	gene-QOZ80_2AG0124920
Poaceae	Hordeum vulgare	1	HORVU.MOREX.r3.3HG0298190.1
Poaceae	Lolium multiflorum	1	gene-QYE76_056849
Poaceae	Oryza coarctata	2	Oco19G004500, Oco20G004470
Poaceae	Oryza sativa	1	LOC_Os10g28640.1
Poaceae	Paspalum vaginatum	1	gene-BS78_01G230900
Poaceae	Puccinellia tenuiflora	2	Pt_Chr0204288, Pt_Chr0600034
Poaceae	Sporobolus alterniflorus	4	Chr06G014020, Chr09G009420, Chr13G015650, Chr15G014820
Poaceae	Thinopyrum elongatum	1	Tel3E01G616000
Poaceae	Triticum dicoccoides	2	gene_TRIDC3AG055480, gene_TRIDC3BG061930
Poaceae	Triticum aestivum	2	TraesCS3A02G389300.1, TraesCS3D02G380300.1
Poaceae	Zea mays	3	Zm00001eb031460_P001, Zm00001eb222890_P001 ... Zm00001eb432290_P001
Poaceae	Zoysia japonica	2	nbis-gene-28003, nbis-gene-48004
Poaceae	Zoysia macrostachya	2	Zma_g13266, Zma_g16062
Portulacaceae	Portulaca oleracea	2	evm.TU.LG01.2329, evm.TU.LG14.1498
Posidoniaceae	Posidonia oceanica	1	gene.Posoc03g01890
Rhizophoraceae	Bruguiera sexangula	1	evm.TU.Scaffold_5_RagTag.1012
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-11335, nbisL1-mrna-21273
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-4219, nbisL1-mrna-7393
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-18376, nbisL1-mrna-18377
Rhizophoraceae	Kandelia candel	2	evm.TU.utg000003l.513, evm.TU.utg000006l.320
Rhizophoraceae	Kandelia obovata	2	Maker00009242, Maker00014026
Rhizophoraceae	Rhizophora apiculata	1	nbisL1-mrna-9968
Rhizophoraceae	Rhizophora mangle	2	nbisL1-mrna-5120, nbisL1-mrna-7632
Salicaceae	Populus euphratica	2	populus_peu15071, populus_peu32736
Solanaceae	Lycium barbarum	2	gene-LOC132603538, gene-LOC132608020
Solanaceae	Solanum chilense	2	SOLCI002233100, SOLCI002820300
Solanaceae	Solanum pennellii	2	gene-LOC107021082, gene-LOC107027004
Tamaricaceae	Reaumuria soongarica	1	gene_1696
Tamaricaceae	Tamarix chinensis	2	TC01G0830, TC08G0858
Zosteraceae	Zostera marina	1	Zosma05g13720.v3.1