halophFGD

Basic Information

Locus ID: Ag9G01784

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: protein serine/threonine kinase activity

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr9	226768994	226770208	+	Ag9G01784

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.33	45,118.47 Da	38.65	97.43	-0.16

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd14066	STKc_IRAK	63	338	4.56447E-92	-
Pfam	PF00069	Protein kinase domain	59	334	8.0E-47	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	37	337	1.62E-75	IPR011009
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	42	133	1.2E-31	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	134	351	1.5E-58	-
SMART	SM00220	serkin_6	57	342	2.0E-31	IPR000719
ProSiteProfiles	PS50011	Protein kinase domain profile.	57	341	36.937103	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	186	198	-	IPR008271
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	63	86	-	IPR017441

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G51550.1	Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception.
RefSeq	XP_017256053.1	PREDICTED: uncharacterized protein LOC108225633 [Daucus carota subsp. sativus]
Swiss-Prot	Q9SCZ4	Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1
TrEMBL	A0A251TJ00	Putative concanavalin A-like lectin/glucanase domain, Rho-associated protein kinase 1/2 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr10g0295101 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	1.193858	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	1.667748	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	3.916532	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	3.153164	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	3.258543	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	7.453092	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	3.271176	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	8.912945	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	10.566649	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	9.160355	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	12.068595	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	8.300511	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	6.304212	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	5.786023	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	0.377412	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	0.558622	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	0.410449	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	0.808031	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	0.196601	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	1.184159	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	0.887093	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	0.368953	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	1.45287	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	0.206917	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	0.870709	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	0.600595	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	0.7184	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	0.580725	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	0.360798	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	0		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	0.017622		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	0.066493		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	1.850511		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	1.347244		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	2.796567		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	0.357694		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	0.075998		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	0		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	2.824281	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	1.46736	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	0.77613	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	3.668402	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	9.375698	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	5.214464	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	6.301892	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	2.458387	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	5.777711	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	2.679893	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	2.714941	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	2.382417	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Apiaceae	Apium graveolens	6	Ag1G01892, Ag1G01893, Ag1G01894, Ag1G01896, Ag1G01897 ... Ag9G01784
Asteraceae	Flaveria trinervia	8	Ftri6G13736, Ftri7G15621, Ftri8G01115, Ftri8G26217 ... Ftri9G00420, Ftri9G19246, Ftri9G22495, Ftri9G29358