halophFGD

Basic Information

Locus ID: Ag9G01545

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr9	197123056	197130043	+	Ag9G01545

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.70	21,802.89 Da	38.59	126.88	0.38

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_017220477.1	PREDICTED: uncharacterized protein LOC108197382 [Daucus carota subsp. sativus]	0
TrEMBL	A0A164SPE9	DUF6598 domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_023559 PE=3 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	0	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	0	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	0	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	0.17177	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	0	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	0	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	1.174886	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	0.712344	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	0.322685	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	0.262504	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	0.335286	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	0.48105	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	0.20327	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	0.179099	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	3.497033	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	2.684064	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	4.449544	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	0	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	4.633627	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	2.894514	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	0.787632	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	3.523102	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	3.203146	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	4.57744	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	2.221675	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	0	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	2.310314	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	3.217476	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	3.909752	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	5.67262		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	3.908823		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	3.223499		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	6.516595		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	7.583341		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	6.986818		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	1.724846		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	4.447752		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	4.146931		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	6.288664	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	8.892003	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	10.097309	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	0	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	0	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	12.235482	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	0.706306	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	0	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	0	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	23.144447	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	30.871719	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	19.863527	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Apiaceae	Apium graveolens	7	Ag10G02925, Ag10G02927, Ag3G01441, Ag3G02834, Ag6G00738 ... Ag9G01545, Ag9G02669