HalophFGD

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Basic Information
Locus ID: Ag9G01321
Species & Taxonomic ID: Apium graveolens & 4045
Genome Assembly: GCA_009905375.1
Description: F-Box protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr9 150158055 150158375 - Ag9G01321
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.38 11,684.22 Da 44.03 92.15 0.04
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 10 76 1.96E-9 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT2G02230.1 phloem protein 2-B1. 0
RefSeq XP_017232024.1 PREDICTED: F-box protein PP2-B11-like [Daucus carota subsp. sativus] 0
Swiss-Prot Q6NPT8 F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1 0
TrEMBL A0A161X115 F-box domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_005512 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
PRJNA723697SRX106922520.394787Shengqin NO.2seedS1-1S1-1initial formation stage (S1)
PRJNA723697SRX106922543.716837Shengqin NO.2seedS1-3S1-3initial formation stage (S1)
PRJNA723697SRX1069225517.29455Shengqin NO.2seedS3-1S3-1middle development stage (S3)
PRJNA723697SRX1069225619.664047Shengqin NO.2seedS3-2S3-2middle development stage (S3)
PRJNA723697SRX1069225717.0574Shengqin NO.2seedS3-3S3-3middle development stage (S3)
PRJNA723697SRX1069225819.302261Shengqin NO.2seedS5-1S5-1maturation stage (S5)
PRJNA723697SRX1069225926.279577Shengqin NO.2seedS5-2S5-2maturation stage (S5)
PRJNA723697SRX1069226021.797354Shengqin NO.2seedS5-3S5-3maturation stage (S5)
PRJNA884666SRX177292720celeryantherW99A-r1male sterile line 
PRJNA884666SRX177292730celeryantherW99A-r2male sterile line 
PRJNA884666SRX177292740celeryantherW99A-r3male sterile line 
PRJNA884666SRX177292750celeryantherW99B-r1maintainer line
PRJNA884666SRX177292760.025853celeryantherW99B-r2maintainer line
PRJNA884666SRX177292770celeryantherW99B-r3maintainer line
PRJNA884180SRX177438890var. secalinum YablochnycollenchymaCol_S1_rep1-1
PRJNA884180SRX177480560var. secalinum YablochnycollenchymaCol_S1_rep3biological replicate 3
PRJNA884180SRX177480570var. secalinum YablochnycollenchymaCol_S1_rep4biological replicate 4
PRJNA884180SRX177486780var. secalinum YablochnyparenchymaPar_S1_rep1Biological replicate 1
PRJNA884180SRX177486790var. secalinum YablochnyparenchymaPar_S1_rep2Biological replicate 2
PRJNA884180SRX177486800.681712var. secalinum YablochnyparenchymaPar_S1_rep3Biological replicate 3
PRJNA884180SRX177486810var. secalinum YablochnyparenchymaPar_S1_rep4Biological replicate 4
PRJNA884180SRX177488981.567711var. secalinum Yablochnyvascular bundleVas_S1_rep1Biological replicate 1
PRJNA884180SRX177488990var. secalinum Yablochnyvascular bundleVas_S1_rep2Biological replicate 2
PRJNA884180SRX177489000var. secalinum Yablochnyvascular bundleVas_S1_rep3Biological replicate 3
PRJNA884180SRX177489010var. secalinum Yablochnyvascular bundleVas_S1_rep4Biological replicate 4
PRJNA884180SRX177491290var. secalinum Yablochnypart of the celery petiole without collenchyma strandsCollenchyma-free_S1_rep1Biological replicate 1
PRJNA884180SRX177491300var. secalinum Yablochnypart of the celery petiole without collenchyma strandsCollenchyma-free_S1_rep2Biological replicate 2
PRJNA884180SRX177491310var. secalinum Yablochnypart of the celery petiole without collenchyma strandsCollenchyma-free_S1_rep3Biological replicate 3
PRJNA884180SRX177491320.577533var. secalinum Yablochnypart of the celery petiole without collenchyma strandsCollenchyma-free_S1_rep4Biological replicate 4
PRJNA1124269SRX249364110leafCK1replicate=biological replicate1
PRJNA1124269SRX249364120leafCK2replicate=biological replicate2
PRJNA1124269SRX249364130leafCK3replicate=biological replicate3
PRJNA1124269SRX249364140leafD1replicate=biological replicate1
PRJNA1124269SRX249364150.096074leafD2replicate=biological replicate2
PRJNA1124269SRX249364160leafD3replicate=biological replicate3
PRJNA1124269SRX249364170leafMD1replicate=biological replicate1
PRJNA1124269SRX249364180leafMD2replicate=biological replicate2
PRJNA1124269SRX249364190leafMD3replicate=biological replicate3
PRJNA387092SRX28333090shanghaihuangxinleafleaves between 0.5 and 1 cm in breadth, folded;stage 2
PRJNA387092SRX28333210shanghaihuangxinleafleaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sionstage 5
PRJNA387092SRX28333230shanghaihuangxinleafleaves >3 cm, unfolded, with clearstem extensionstage 7
PRJNA543957SRX58795980Zhangzhou lvqingstemSe3100 ppm Na2SeO4
PRJNA543957SRX58795990Zhangzhou lvqingstemSe2100 ppm Na2SeO4
PRJNA543957SRX58796000Zhangzhou lvqingstemMock2mock
PRJNA543957SRX58796010Zhangzhou lvqingstemMock1mock
PRJNA543957SRX58796020Zhangzhou lvqingstemSe1100 ppm Na2SeO4
PRJNA543957SRX58796030Zhangzhou lvqingstemMock3mock
PRJNA609149SRX78159170Jinnan Shiqinflower budearly flower budearly flower bud
PRJNA609149SRX78159180Jinnan Shiqinflower budmiddle flower budmiddle flower bud
PRJNA609149SRX78159190Jinnan Shiqinflower budearly flowering periodearly flowering period
Network
🔍 Co-expression Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 10 jg26261, jg26584, jg26585, jg26586, jg26587, jg27683 ...
jg27796, jg27797, jg28241, jg36051
Aizoaceae Mesembryanthemum crystallinum 6 gene_10357, gene_11968, gene_19524, gene_19525, gene_19526 ...
gene_19527
Amaranthaceae Atriplex hortensis 8 Ah000951, Ah000957, Ah000967, Ah000977, Ah000978, Ah005633 ...
Ah005706, Ah009384
Amaranthaceae Beta vulgaris 5 BVRB_2g028750, BVRB_3g060530, BVRB_4g076140, BVRB_4g076920 ...
BVRB_4g080830
Amaranthaceae Salicornia bigelovii 4 Sbi_jg17186, Sbi_jg17262, Sbi_jg22102, Sbi_jg61881
Amaranthaceae Salicornia europaea 3 Seu_jg16029, Seu_jg446, Seu_jg516
Amaranthaceae Suaeda aralocaspica 5 GOSA_00004389, GOSA_00008648, GOSA_00008649, GOSA_00015379 ...
GOSA_00015435
Amaranthaceae Suaeda glauca 7 Sgl13154, Sgl13155, Sgl18374, Sgl24437, Sgl29612, Sgl66480 ...
Sgl70814
Amaranthaceae Chenopodium album 18 gene:ENSEOMG00000004164, gene:ENSEOMG00000009751 ...
gene:ENSEOMG00000010626, gene:ENSEOMG00000010882, gene:ENSEOMG00000016729, gene:ENSEOMG00000017157, gene:ENSEOMG00000020094, gene:ENSEOMG00000024533, gene:ENSEOMG00000025981, gene:ENSEOMG00000025998, gene:ENSEOMG00000026918, gene:ENSEOMG00000028028, gene:ENSEOMG00000037026, gene:ENSEOMG00000041436, gene:ENSEOMG00000042358, gene:ENSEOMG00000043266, gene:ENSEOMG00000051148, gene:ENSEOMG00000052332
Amaranthaceae Chenopodium quinoa 12 CQ.Regalona.r1.2AG0017440, CQ.Regalona.r1.2BG0019200 ...
CQ.Regalona.r1.4AG0007100, CQ.Regalona.r1.4AG0007110, CQ.Regalona.r1.4AG0007720, CQ.Regalona.r1.4BG0007310, CQ.Regalona.r1.4BG0007320, CQ.Regalona.r1.4BG0007890, CQ.Regalona.r1.5AG0021310, CQ.Regalona.r1.5AG0027840, CQ.Regalona.r1.5AG0027850, CQ.Regalona.r1.7BG0007230
Anacardiaceae Pistacia vera 10 pistato.v30081670, pistato.v30097540, pistato.v30097930 ...
pistato.v30097940, pistato.v30097950, pistato.v30241010, pistato.v30241020, pistato.v30241030, pistato.v30241090, pistato.v30241100
Apiaceae Apium graveolens 7 Ag10G01864, Ag11G03601, Ag2G01954, Ag5G02651, Ag7G00957 ...
Ag7G01461, Ag9G01321
Arecaceae Cocos nucifera 3 COCNU_08G011730, COCNU_09G009650, COCNU_09G009660
Arecaceae Phoenix dactylifera 11 gene-LOC103706934, gene-LOC103711894, gene-LOC103717148 ...
gene-LOC103717149, gene-LOC103723234, gene-LOC120103899, gene-LOC120104642, gene-LOC120104643, gene-LOC120107948, gene-LOC120107949, gene-LOC120108109
Asparagaceae Asparagus officinalis 6 AsparagusV1_01.1084.V1.1, AsparagusV1_01.744.V1.1 ...
AsparagusV1_01.745.V1.1, AsparagusV1_04.136.V1.1, AsparagusV1_07.1969.V1.1, AsparagusV1_10.1919.V1.1
Asteraceae Flaveria trinervia 8 Ftri12G20025, Ftri15G04606, Ftri15G13811, Ftri17G15479 ...
Ftri4G02323, Ftri4G02689, Ftri4G28510, Ftri8G20905
Brassicaceae Arabidopsis thaliana 15 AT1G09155.1, AT1G56240.1, AT1G56250.1, AT1G80110.1 ...
AT2G02230.1, AT2G02240.1, AT2G02250.1, AT2G02280.1, AT2G02300.1, AT2G02310.1, AT2G02320.1, AT2G02340.1, AT2G02350.1, AT2G02360.1, AT5G24560.1
Brassicaceae Eutrema salsugineum 12 Thhalv10004545m.g.v1.0, Thhalv10004729m.g.v1.0 ...
Thhalv10004797m.g.v1.0, Thhalv10004854m.g.v1.0, Thhalv10004855m.g.v1.0, Thhalv10005290m.g.v1.0, Thhalv10005433m.g.v1.0, Thhalv10005457m.g.v1.0, Thhalv10008383m.g.v1.0, Thhalv10019836m.g.v1.0, Thhalv10024163m.g.v1.0, Thhalv10026793m.g.v1.0
Brassicaceae Schrenkiella parvula 9 Sp1g07740.v2.2, Sp2g06670.v2.2, Sp2g13610.v2.2 ...
Sp2g13620.v2.2, Sp2g13630.v2.2, Sp2g13635.v2.2, Sp2g13640.v2.2, Sp2g22810.v2.2, Sp5g35690.v2.2
Brassicaceae Brassica nigra 14 BniB01g041580.2N, BniB02g065410.2N, BniB02g077370.2N ...
BniB03g003110.2N, BniB04g009070.2N, BniB04g009080.2N, BniB04g009090.2N, BniB04g009100.2N, BniB04g009140.2N, BniB04g009150.2N, BniB04g030680.2N, BniB06g068630.2N, BniB07g044950.2N, BniB08g021580.2N
Casuarinaceae Casuarina equisetifolia 8 Ceq01G0698, Ceq01G0704, Ceq01G0751, Ceq06G1148, Ceq06G2210 ...
Ceq07G0757, Ceq07G0758, Ceq07G0760
Casuarinaceae Casuarina glauca 13 Cgl01G0818, Cgl01G0821, Cgl01G0872, Cgl01G0873, Cgl01G0882 ...
Cgl06G1197, Cgl06G1198, Cgl06G2329, Cgl07G0805, Cgl07G0806, Cgl07G0807, Cgl07G0808, Cgl07G0812
Cymodoceaceae Cymodocea nodosa 9 gene.Cymno10g00270, gene.Cymno10g00300, gene.Cymno10g00310 ...
gene.Cymno10g00320, gene.Cymno10g00330, gene.Cymno10g00470, gene.Cymno10g00480, gene.Cymno16g02940, gene.Cymno16g02970
Hydrocharitaceae Thalassia testudinum 4 gene.Thate04g09040, gene.Thate08g24510, gene.Thate08g24520 ...
gene.Thate08g24550
Malvaceae Hibiscus hamabo Siebold & Zucc. 2 nbisL1-mrna-12589, nbisL1-mrna-8031
Nitrariaceae Nitraria sibirica 9 evm.TU.LG03.1736, evm.TU.LG03.2499, evm.TU.LG03.2500 ...
evm.TU.LG04.902, evm.TU.LG04.903, evm.TU.LG04.904, evm.TU.LG05.327, evm.TU.LG05.334, evm.TU.LG11.600
Plantaginaceae Plantago ovata 8 Pov_00014694, Pov_00014703, Pov_00017069, Pov_00021333 ...
Pov_00021339, Pov_00028630, Pov_00029267, Pov_00039250
Plumbaginaceae Limonium bicolor 8 Lb0G37779, Lb1G06642, Lb1G06828, Lb1G06829, Lb1G06834 ...
Lb1G07270, Lb1G07271, Lb3G16359
Poaceae Echinochloa crus-galli 14 AH07.3912, AH07.3913, AH07.3914, AH09.680, BH02.3243 ...
BH04.110, BH04.1506, BH07.3720, BH07.3721, BH07.3722, BH09.569, CH05.91, CH07.3781, CH07.3783
Poaceae Eleusine coracana subsp. coracana 7 gene-QOZ80_2AG0149990, gene-QOZ80_2AG0150020 ...
gene-QOZ80_2AG0150030, gene-QOZ80_2AG0150040, gene-QOZ80_2BG0204200, gene-QOZ80_2BG0205460, gene-QOZ80_2BG0205480
Poaceae Hordeum vulgare 6 HORVU.MOREX.r3.2HG0195980.1, HORVU.MOREX.r3.5HG0536570.1 ...
HORVU.MOREX.r3.6HG0628210.1, HORVU.MOREX.r3.6HG0628610.1, HORVU.MOREX.r3.6HG0628630.1, HORVU.MOREX.r3.7HG0644240.1
Poaceae Lolium multiflorum 16 gene-QYE76_015147, gene-QYE76_018750, gene-QYE76_026336 ...
gene-QYE76_026340, gene-QYE76_026342, gene-QYE76_026343, gene-QYE76_026347, gene-QYE76_026352, gene-QYE76_026679, gene-QYE76_026684, gene-QYE76_026685, gene-QYE76_026687, gene-QYE76_026692, gene-QYE76_028650, gene-QYE76_059712, gene-QYE76_059721
Poaceae Oryza coarctata 3 Oco03G024990, Oco03G025000, Oco03G025010
Poaceae Oryza sativa 9 LOC_Os02g56750.1, LOC_Os02g56760.1, LOC_Os02g56770.1 ...
LOC_Os02g56800.1, LOC_Os02g56810.1, LOC_Os02g56820.1, LOC_Os02g56840.1, LOC_Os12g03594.1, LOC_Os12g03740.1
Poaceae Paspalum vaginatum 4 gene-BS78_02G092100, gene-BS78_04G315700 ...
gene-BS78_04G315900, gene-BS78_04G316000
Poaceae Puccinellia tenuiflora 11 Pt_Chr0106749, Pt_Chr0201150, Pt_Chr0404949, Pt_Chr0404956 ...
Pt_Chr0502551, Pt_Chr0604253, Pt_Chr0604259, Pt_Chr0604263, Pt_Chr0604265, Pt_Chr0604317, Pt_Chr0604347
Poaceae Sporobolus alterniflorus 11 Chr07G017390, Chr09G016820, Chr09G016840, Chr0G014090 ...
Chr13G001040, Chr13G001050, Chr13G001060, Chr13G001070, Chr13G001090, Chr15G001010, Chr31G005150
Poaceae Thinopyrum elongatum 13 Tel4E01G442300, Tel5E01G881600, Tel6E01G674500 ...
Tel6E01G674900, Tel6E01G690300, Tel6E01G692500, Tel6E01G692600, Tel6E01G693200, Tel6E01G694300, Tel6E01G694700, Tel6E01G694800, Tel7E01G134300, Tel7E01G134500
Poaceae Triticum dicoccoides 13 gene_TRIDC4AG005800, gene_TRIDC4BG045500 ...
gene_TRIDC5BG082570, gene_TRIDC6AG056820, gene_TRIDC6AG056990, gene_TRIDC6AG057120, gene_TRIDC6AG057130, gene_TRIDC6BG066550, gene_TRIDC6BG066560, gene_TRIDC6BG066580, gene_TRIDC6BG066590, gene_TRIDC7AG006840, gene_TRIDC7BG041960
Poaceae Triticum aestivum 33 TraesCS3B02G018900.1, TraesCS4A02G041300.1 ...
TraesCS4A02G319200.1, TraesCS4B02G262300.1, TraesCS4D02G262300.1, TraesCS5B02G558800.1, TraesCS5B02G559800.1, TraesCS5B02G560000.1, TraesCS5B02G560100.1, TraesCS5D02G035000.1, TraesCS5D02G566000.2, TraesCS6A02G381900.1, TraesCS6A02G383100.1, TraesCS6A02G383900.1, TraesCS6A02G384000.2, TraesCS6A02G384100.1, TraesCS6B02G421100.1, TraesCS6B02G422300.1, TraesCS6B02G422400.1, TraesCS6B02G423200.1, TraesCS6B02G423400.1, TraesCS6B02G423500.1, TraesCS6D02G366600.1, TraesCS6D02G368000.1, TraesCS6D02G368900.1, TraesCS6D02G369000.1, TraesCS6D02G369100.1, TraesCS6D02G369200.1, TraesCS7A02G063400.1, TraesCS7A02G063600.1, TraesCS7D02G058100.1, TraesCSU02G190600.1, TraesCSU02G197600.1
Poaceae Zea mays 4 Zm00001eb191600_P001, Zm00001eb202360_P001 ...
Zm00001eb258580_P001, Zm00001eb258590_P001
Poaceae Zoysia japonica 6 nbis-gene-39833, nbis-gene-39835, nbis-gene-41561 ...
nbis-gene-8343, nbis-gene-8344, nbis-gene-8345
Poaceae Zoysia macrostachya 6 Zma_g14679, Zma_g14680, Zma_g14681, Zma_g17391, Zma_g17393 ...
Zma_g17928
Portulacaceae Portulaca oleracea 17 evm.TU.LG02.920, evm.TU.LG02.921, evm.TU.LG02.922 ...
evm.TU.LG02.923, evm.TU.LG05.1901, evm.TU.LG08.771, evm.TU.LG09.1046, evm.TU.LG09.1047, evm.TU.LG09.1048, evm.TU.LG09.1049, evm.TU.LG09.1050, evm.TU.LG09.1051, evm.TU.LG18.1274, evm.TU.LG18.1919, evm.TU.LG20.3, evm.TU.LG20.609, evm.TU.LG22.1160
Posidoniaceae Posidonia oceanica 6 gene.Posoc06g00800, gene.Posoc06g00830, gene.Posoc06g00840 ...
gene.Posoc06g00850, gene.Posoc06g00860, gene.Posoc08g09810
Rhizophoraceae Bruguiera sexangula 7 evm.TU.57467.1, evm.TU.57467.2, evm.TU.Scaffold_1_RagTag.525 ...
evm.TU.Scaffold_1_RagTag.92, evm.TU.Scaffold_1_RagTag.93, evm.TU.Scaffold_3_RagTag.1364, evm.TU.Scaffold_6_RagTag.966
Rhizophoraceae Carallia pectinifolia 5 nbisL1-mrna-15701, nbisL1-mrna-1682, nbisL1-mrna-7539 ...
nbisL1-mrna-8184, nbisL1-mrna-8185
Rhizophoraceae Ceriops tagal 3 nbisL1-mrna-18820, nbisL1-mrna-2542, nbisL1-mrna-5157
Rhizophoraceae Ceriops zippeliana 5 nbisL1-mrna-2609, nbisL1-mrna-5177, nbisL1-mrna-5178 ...
nbisL1-mrna-5629, nbisL1-mrna-834
Rhizophoraceae Kandelia candel 4 evm.TU.utg000011l.609, evm.TU.utg000012l.378 ...
evm.TU.utg000012l.67, evm.TU.utg000019l.421
Rhizophoraceae Kandelia obovata 4 Maker00002077, Maker00007710, Maker00010892, Maker00011388
Rhizophoraceae Rhizophora apiculata 6 nbisL1-mrna-12235, nbisL1-mrna-15155, nbisL1-mrna-19917 ...
nbisL1-mrna-7891, nbisL1-mrna-8421, nbisL1-mrna-8422
Rhizophoraceae Rhizophora mangle 6 nbisL1-mrna-18137, nbisL1-mrna-4358, nbisL1-mrna-730 ...
nbisL1-mrna-731, nbisL1-mrna-82, nbisL1-mrna-83
Salicaceae Populus euphratica 7 populus_peu04059, populus_peu04655, populus_peu04657 ...
populus_peu04659, populus_peu13026, populus_peu13028, populus_peu15654
Solanaceae Lycium barbarum 23 gene-LOC132598897, gene-LOC132601942, gene-LOC132602643 ...
gene-LOC132603242, gene-LOC132604360, gene-LOC132604362, gene-LOC132604366, gene-LOC132604367, gene-LOC132604368, gene-LOC132610438, gene-LOC132614868, gene-LOC132615391, gene-LOC132615982, gene-LOC132628789, gene-LOC132640043, gene-LOC132640271, gene-LOC132642231, gene-LOC132642237, gene-LOC132642366, gene-LOC132642367, gene-LOC132645995, gene-LOC132645996, gene-LOC132645997
Solanaceae Solanum chilense 12 SOLCI000857300, SOLCI000857400, SOLCI000857500 ...
SOLCI002045200, SOLCI002450900, SOLCI003364100, SOLCI003364200, SOLCI003810900, SOLCI004928500, SOLCI005163600, SOLCI005827000, SOLCI005949500
Solanaceae Solanum pennellii 11 gene-LOC107002937, gene-LOC107005456, gene-LOC107005458 ...
gene-LOC107006711, gene-LOC107010981, gene-LOC107015823, gene-LOC107017505, gene-LOC107018859, gene-LOC107019907, gene-LOC107027555, gene-LOC107028960
Tamaricaceae Reaumuria soongarica 6 MSTRG.11737_chr07_-, STRG.10298_chr07_+, STRG.10300_chr07_+ ...
gene_18135, gene_5887, gene_9593
Tamaricaceae Tamarix chinensis 5 TC02G0872, TC02G1514, TC02G3144, TC02G3172, TC02G3175
Zosteraceae Zostera marina 8 Zosma01g38750.v3.1, Zosma02g01350.v3.1, Zosma02g01380.v3.1 ...
Zosma02g01390.v3.1, Zosma03g27220.v3.1, Zosma05g08470.v3.1, Zosma05g08550.v3.1, Zosma06g07760.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.