halophFGD

Basic Information

Locus ID: Ag9G01286

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: Protein kinase domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr9	145356640	145359014	+	Ag9G01286

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.66	34,290.03 Da	55.85	79.12	-0.36

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	15	36	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	18	36	-	-

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G37790.1	Protein kinase superfamily protein.
RefSeq	XP_017255236.1	PREDICTED: serine/threonine-protein kinase CDL1-like [Daucus carota subsp. sativus]
TrEMBL	A0A161YED3	Protein kinase domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_021456 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	13.259272	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	6.705297	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	17.732521	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	16.993103	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	11.262928	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	40.226063	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	19.047215	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	50.642746	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	16.046976	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	15.415847	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	19.39592	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	20.560356	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	16.47217	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	10.935194	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	1.206351	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	1.852411	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	4.637732	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	5.865589	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	3.232828	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	6.538235	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	6.099181	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	8.515195	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	8.546695	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	13.071377	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	9.863061	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	5.908381	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	3.730547	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	9.60778	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	6.702321	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	5.761893		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	6.994239		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	7.499714		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	13.138997		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	19.825346		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	15.108792		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	6.014116		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	6.176685		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	8.605551		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	12.95392	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	9.911398	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	4.186237	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	3.299482	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	2.672878	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	8.523245	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	5.005398	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	3.191653	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	5.381233	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	11.788485	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	34.061001	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	32.229115	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	2	jg30778, jg39857
Aizoaceae	Mesembryanthemum crystallinum	2	gene_23903, gene_7836
Amaranthaceae	Atriplex hortensis	2	Ah035581, Ah035587
Amaranthaceae	Beta vulgaris	1	BVRB_2g027820
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg21637, Sbi_jg22175
Amaranthaceae	Salicornia europaea	1	Seu_jg16107
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00008717
Amaranthaceae	Suaeda glauca	4	Sgl34075, Sgl62657, Sgl67217, Sgl67278
Amaranthaceae	Chenopodium album	3	gene:ENSEOMG00000017577, gene:ENSEOMG00000018218 ... gene:ENSEOMG00000050466
Amaranthaceae	Chenopodium quinoa	2	CQ.Regalona.r1.2AG0018350, CQ.Regalona.r1.2BG0020020
Anacardiaceae	Pistacia vera	1	pistato.v30190600
Apiaceae	Apium graveolens	1	Ag9G01286
Arecaceae	Cocos nucifera	3	COCNU_03G008170, COCNU_03G008180, COCNU_03G008520
Arecaceae	Phoenix dactylifera	2	gene-LOC103701857, gene-LOC103721400
Asparagaceae	Asparagus officinalis	1	AsparagusV1_07.3690.V1.1
Asteraceae	Flaveria trinervia	1	Ftri13G17838
Brassicaceae	Arabidopsis thaliana	2	AT1G66460.1, AT5G37790.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10019672m.g.v1.0, Thhalv10027710m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp5g21520.v2.2, Sp7g04250.v2.2
Brassicaceae	Brassica nigra	3	BniB01g030130.2N, BniB03g043660.2N, BniB06g060680.2N
Casuarinaceae	Casuarina equisetifolia	1	Ceq08G0657
Casuarinaceae	Casuarina glauca	1	Cgl08G0632
Cymodoceaceae	Cymodocea nodosa	1	gene.Cymno05g09820
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate06g16760
Nitrariaceae	Nitraria sibirica	1	evm.TU.LG02.579
Plantaginaceae	Plantago ovata	2	Pov_00013811, Pov_00029847
Plumbaginaceae	Limonium bicolor	1	Lb3G20900
Portulacaceae	Portulaca oleracea	4	evm.TU.LG05.739, evm.TU.LG06.810, evm.TU.LG11.37 ... evm.TU.LG25.587
Posidoniaceae	Posidonia oceanica	1	gene.Posoc01g21550
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.60356.8, evm.TU.Scaffold_3_RagTag.741 ... evm.TU.Scaffold_6_RagTag.1367
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-1219, nbisL1-mrna-16270
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-14025, nbisL1-mrna-7257
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-1119, nbisL1-mrna-6422
Rhizophoraceae	Kandelia candel	2	evm.TU.utg000011l.837, evm.TU.utg000019l.763
Rhizophoraceae	Kandelia obovata	2	Maker00008204, Maker00012508
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-13467, nbisL1-mrna-5231
Rhizophoraceae	Rhizophora mangle	2	nbisL1-mrna-13164, nbisL1-mrna-3954
Salicaceae	Populus euphratica	2	populus_peu09637, populus_peu24885
Solanaceae	Lycium barbarum	2	gene-LOC132622500, gene-LOC132623108
Solanaceae	Solanum chilense	2	SOLCI001738100, SOLCI003445400
Solanaceae	Solanum pennellii	2	gene-LOC107008893, gene-LOC107009349
Tamaricaceae	Reaumuria soongarica	1	STRG.139_chr01_+
Tamaricaceae	Tamarix chinensis	1	TC01G0178
Zosteraceae	Zostera marina	1	Zosma01g19470.v3.1