halophFGD

Basic Information

Locus ID: Ag9G00901

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: Minor allergen Alt a

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr9	94389331	94392436	-	Ag9G00901

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.52	21,880.82 Da	37.09	74.14	-0.10

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF03358	NADPH-dependent FMN reductase	17	144	1.4E-12	IPR005025
SUPERFAMILY	SSF52218	Flavoproteins	3	200	3.61E-60	IPR029039
Gene3D	G3DSA:3.40.50.360	-	1	201	8.6E-83	IPR029039
TIGRFAM	TIGR01755	flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV	3	199	4.1E-70	IPR010089
ProSiteProfiles	PS50902	Flavodoxin-like domain profile.	5	192	21.624794	IPR008254

Gene Ontology

Molecular Function:

GO:0003955 (NAD(P)H dehydrogenase (quinone) activity) GO:0010181 (FMN binding) GO:0016491 (oxidoreductase activity)

KEGG Pathway

KO Term:

K03809 (NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2])

Pathway:

ko00130 (Ubiquinone and other terpenoid-quinone biosynthesis) map00130 (Ubiquinone and other terpenoid-quinone biosynthesis) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites)

Reaction:

R02964 (Menaquinone + H+ + NADH <=> Menaquinol + NAD+) R03643 (Vitamin K + NADH + H+ <=> Reduced Vitamin K + NAD+) R03816 (Phylloquinone + NADH + H+ <=> Phylloquinol + NAD+)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G27270.1	Quinone reductase family protein.
RefSeq	XP_017255833.1	PREDICTED: probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 [Daucus carota subsp. sativus]
Swiss-Prot	Q6NQE2	Probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 OS=Arabidopsis thaliana OX=3702 GN=At4g27270 PE=1 SV=1
TrEMBL	A0A164VCM2	NAD(P)H dehydrogenase (quinone) OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_022498 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	75.938286	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	182.568237	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	65.412048	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	109.81028	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	107.187782	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	33.511494	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	9.512681	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	29.803705	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	1.802318	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	0.91332	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	1.366118	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	1.40884	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	3.327944	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	2.64466	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	1.615892	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	3.711765	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	12.164299	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	63.48938	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	19.682171	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	35.187698	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	56.476234	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	280.87619	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	318.951355	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	207.82132	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	172.187302	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	102.928955	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	84.80471	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	114.988983	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	98.759979	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	0.109456		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	0.299787		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	0.709349		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	3.619683		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	2.095452		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	0.964454		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	0		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	0.335047		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	0.251924		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	3.207618	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	7.432754	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	0.769566	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	2.472801	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	59.422157	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	79.824875	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	216.729492	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	3.463126	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	453.060181	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	3.218231	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	3.22434	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	5.165609	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	11	jg16655, jg19420, jg20370, jg21451, jg24504, jg24828 ... jg26221, jg30292, jg30861, jg38323, jg39785
Aizoaceae	Mesembryanthemum crystallinum	3	gene_200, gene_5803, gene_7387
Amaranthaceae	Atriplex hortensis	4	Ah008418, Ah017793, Ah026578, Ah027863
Amaranthaceae	Beta vulgaris	1	BVRB_7g172390
Amaranthaceae	Salicornia bigelovii	8	Sbi_jg14756, Sbi_jg1607, Sbi_jg18806, Sbi_jg25959 ... Sbi_jg34951, Sbi_jg37239, Sbi_jg55535, Sbi_jg9788
Amaranthaceae	Salicornia europaea	4	Seu_jg18891, Seu_jg26087, Seu_jg3141, Seu_jg5062
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00006999, GOSA_00023152, GOSA_00023820
Amaranthaceae	Suaeda glauca	8	Sgl22947, Sgl28067, Sgl34729, Sgl40151, Sgl45675, Sgl50434 ... Sgl72766, Sgl76304
Amaranthaceae	Chenopodium album	12	gene:ENSEOMG00000001385, gene:ENSEOMG00000002397 ... gene:ENSEOMG00000005165, gene:ENSEOMG00000008786, gene:ENSEOMG00000012066, gene:ENSEOMG00000027259, gene:ENSEOMG00000030952, gene:ENSEOMG00000031438, gene:ENSEOMG00000035894, gene:ENSEOMG00000042608, gene:ENSEOMG00000043436, gene:ENSEOMG00000047133
Amaranthaceae	Chenopodium quinoa	5	CQ.Regalona.r1.4BG0021470, CQ.Regalona.r1.6AG0017970 ... CQ.Regalona.r1.6BG0019060, CQ.Regalona.r1.8AG0003400, CQ.Regalona.r1.8BG0003480
Anacardiaceae	Pistacia vera	5	pistato.v30061600, pistato.v30073990, pistato.v30113920 ... pistato.v30159870, pistato.v30207540
Apiaceae	Apium graveolens	6	Ag4G02331, Ag5G00494, Ag6G00946, Ag6G02588, Ag7G00648 ... Ag9G00901
Arecaceae	Cocos nucifera	5	COCNU_06G010810, COCNU_08G001340, COCNU_12G003930 ... scaffold001097G000040, scaffold015512G000010
Arecaceae	Phoenix dactylifera	7	gene-LOC103697120, gene-LOC103707166, gene-LOC103709877 ... gene-LOC103718449, gene-LOC103721714, gene-LOC120108739, gene-LOC120112445
Asparagaceae	Asparagus officinalis	4	AsparagusV1_01.3403.V1.1, AsparagusV1_03.896.V1.1 ... AsparagusV1_06.263.V1.1, AsparagusV1_07.3915.V1.1
Asteraceae	Flaveria trinervia	6	Ftri12G30104, Ftri13G15435, Ftri14G24793, Ftri16G14383 ... Ftri2G31476, Ftri3G31654
Brassicaceae	Arabidopsis thaliana	4	AT4G27270.1, AT4G36750.1, AT5G54500.2, AT5G58800.1
Brassicaceae	Eutrema salsugineum	4	Thhalv10014688m.g.v1.0, Thhalv10014706m.g.v1.0 ... Thhalv10025964m.g.v1.0, Thhalv10026307m.g.v1.0
Brassicaceae	Schrenkiella parvula	4	Sp6g16470.v2.2, Sp6g20500.v2.2, Sp7g25190.v2.2 ... Sp7g34410.v2.2
Brassicaceae	Brassica nigra	8	BniB02g032990.2N, BniB02g088190.2N, BniB03g042060.2N ... BniB05g002070.2N, BniB05g010130.2N, BniB05g034350.2N, BniB05g038230.2N, BniB08g015920.2N
Casuarinaceae	Casuarina equisetifolia	5	Ceq01G1195, Ceq04G1513, Ceq05G0740, Ceq08G1911, Ceq09G0063
Casuarinaceae	Casuarina glauca	5	Cgl01G1340, Cgl04G1682, Cgl05G0749, Cgl08G1971, Cgl09G0075
Cymodoceaceae	Cymodocea nodosa	3	gene.Cymno05g09590, gene.Cymno15g05580, gene.Cymno17g06320
Dunaliellaceae	Dunaliella salina	1	Dusal.0033s00026.v1.0
Hydrocharitaceae	Thalassia testudinum	4	gene.Thate05g29250, gene.Thate07g19110, gene.Thate07g19120 ... gene.Thate08g10430
Malvaceae	Hibiscus hamabo Siebold & Zucc.	3	nbisL1-mrna-7052, nbisL1-mrna-7658, nbisL1-mrna-9988
Nitrariaceae	Nitraria sibirica	5	evm.TU.LG02.2286, evm.TU.LG05.1728, evm.TU.LG08.100 ... evm.TU.LG09.1116, evm.TU.LG12.1077
Plantaginaceae	Plantago ovata	6	Pov_00005832, Pov_00005833, Pov_00005834, Pov_00007546 ... Pov_00008990, Pov_00028221
Plumbaginaceae	Limonium bicolor	4	Lb1G00304, Lb2G11377, Lb2G14481, Lb6G31138
Poaceae	Echinochloa crus-galli	10	AH02.3508, AH03.33, AH05.1860, BH02.3447, BH03.34, BH05.2007 ... BH08.266, CH03.42, CH05.2077, CH08.323
Poaceae	Eleusine coracana subsp. coracana	11	gene-QOZ80_1AG0036020, gene-QOZ80_1BG0086020 ... gene-QOZ80_2AG0125390, gene-QOZ80_2BG0181040, gene-QOZ80_5AG0367690, gene-QOZ80_5BG0415290, gene-QOZ80_7AG0552360, gene-QOZ80_7AG0552790, gene-QOZ80_7BG0583400, gene-QOZ80_7BG0583820, gene-QOZ80_8BG0644360
Poaceae	Hordeum vulgare	8	HORVU.MOREX.r3.1HG0037670.1, HORVU.MOREX.r3.1HG0067700.1 ... HORVU.MOREX.r3.2HG0115970.1, HORVU.MOREX.r3.2HG0157260.1, HORVU.MOREX.r3.3HG0294100.1, HORVU.MOREX.r3.4HG0387550.1, HORVU.MOREX.r3.4HG0404680.1, HORVU.MOREX.r3.7HG0701760.1
Poaceae	Lolium multiflorum	7	gene-QYE76_010979, gene-QYE76_014736, gene-QYE76_033177 ... gene-QYE76_043057, gene-QYE76_043129, gene-QYE76_056054, gene-QYE76_068307
Poaceae	Oryza coarctata	8	Oco01G022090, Oco02G022640, Oco09G013370, Oco10G013510 ... Oco15G001710, Oco16G001830, Oco19G004790, Oco20G004590
Poaceae	Oryza sativa	3	LOC_Os01g57570.1, LOC_Os05g42190.1, LOC_Os08g04460.1
Poaceae	Paspalum vaginatum	4	gene-BS78_01G227600, gene-BS78_02G099800 ... gene-BS78_03G299900, gene-BS78_09G192700
Poaceae	Puccinellia tenuiflora	10	Pt_Chr0107734, Pt_Chr0107873, Pt_Chr0303290, Pt_Chr0303318 ... Pt_Chr0501192, Pt_Chr0502409, Pt_Chr0504302, Pt_Chr0504348, Pt_Chr0601646, Pt_Chr0601662
Poaceae	Sporobolus alterniflorus	11	Chr02G007770, Chr03G017780, Chr05G025780, Chr06G013910 ... Chr08G024000, Chr09G009690, Chr0G018400, Chr13G015390, Chr15G014720, Chr18G013220, Chr22G004510
Poaceae	Thinopyrum elongatum	8	Tel1E01G258300, Tel1E01G519200, Tel2E01G261500 ... Tel2E01G480900, Tel2E01G481000, Tel3E01G515800, Tel4E01G362000, Tel7E01G520900
Poaceae	Triticum dicoccoides	16	gene_TRIDC1AG047680, gene_TRIDC1BG025210 ... gene_TRIDC1BG053940, gene_TRIDC2AG015270, gene_TRIDC2AG015280, gene_TRIDC2AG036660, gene_TRIDC2AG036700, gene_TRIDC2BG018370, gene_TRIDC3AG046500, gene_TRIDC3BG052890, gene_TRIDC4AG013480, gene_TRIDC4BG036880, gene_TRIDC7AG042840, gene_TRIDC7AG059030, gene_TRIDC7BG034040, gene_TRIDC7BG051880
Poaceae	Triticum aestivum	31	TraesCS1A02G136100.1, TraesCS1A02G320500.1 ... TraesCS1B02G155100.1, TraesCS1B02G332700.1, TraesCS1D02G134600.1, TraesCS1D02G320300.1, TraesCS2A02G124100.1, TraesCS2A02G124200.1, TraesCS2A02G259000.1, TraesCS2A02G259100.1, TraesCS2A02G259200.1, TraesCS2A02G259300.1, TraesCS2B02G146000.1, TraesCS2B02G284300.1, TraesCS2D02G126900.1, TraesCS2D02G127000.1, TraesCS2D02G264400.1, TraesCS2D02G264500.1, TraesCS3A02G323800.1, TraesCS3B02G353000.1, TraesCS3D02G317400.1, TraesCS4A02G098900.1, TraesCS4B02G205400.1, TraesCS4D02G206300.1, TraesCS7A02G306900.1, TraesCS7A02G425200.1, TraesCS7B02G207200.1, TraesCS7B02G324800.1, TraesCS7D02G303800.1, TraesCS7D02G416600.1, TraesCSU02G272800.1.cds1
Poaceae	Zea mays	6	Zm00001eb095360_P001, Zm00001eb151280_P002 ... Zm00001eb222860_P001, Zm00001eb282340_P001, Zm00001eb352760_P004, Zm00001eb369750_P001
Poaceae	Zoysia japonica	6	nbis-gene-11725, nbis-gene-14364, nbis-gene-21337 ... nbis-gene-25261, nbis-gene-31278, nbis-gene-52670
Poaceae	Zoysia macrostachya	5	Zma_g11295, Zma_g13286, Zma_g28526, Zma_g4658, Zma_g8792
Portulacaceae	Portulaca oleracea	13	evm.TU.LG01.1740, evm.TU.LG02.1698, evm.TU.LG02.1700 ... evm.TU.LG02.1701, evm.TU.LG05.208, evm.TU.LG08.1508, evm.TU.LG09.215, evm.TU.LG09.216, evm.TU.LG09.217, evm.TU.LG14.967, evm.TU.LG22.400, evm.TU.LG24.170, evm.TU.LG25.1103
Posidoniaceae	Posidonia oceanica	2	gene.Posoc01g21140, gene.Posoc10g01000
Rhizophoraceae	Bruguiera sexangula	6	evm.TU.Scaffold_12_RagTag.141, evm.TU.Scaffold_12_RagTag.951 ... evm.TU.Scaffold_13_RagTag.135, evm.TU.Scaffold_5_RagTag.440, evm.TU.Scaffold_6_RagTag.1982, evm.TU.Scaffold_9_RagTag.263
Rhizophoraceae	Carallia pectinifolia	6	nbisL1-mrna-17147, nbisL1-mrna-21989, nbisL1-mrna-29609 ... nbisL1-mrna-29826, nbisL1-mrna-354, nbisL1-mrna-514
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-15463, nbisL1-mrna-1874, nbisL1-mrna-21177 ... nbisL1-mrna-4162
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-11816, nbisL1-mrna-19450, nbisL1-mrna-20837 ... nbisL1-mrna-7227
Rhizophoraceae	Kandelia candel	5	evm.TU.utg000003l.388, evm.TU.utg000011l.1201 ... evm.TU.utg000015l.93, evm.TU.utg000027l.481, evm.TU.utg000027l.66
Rhizophoraceae	Kandelia obovata	4	Maker00007200, Maker00009762, Maker00015630, Maker00018002
Rhizophoraceae	Rhizophora apiculata	6	nbisL1-mrna-10281, nbisL1-mrna-10675, nbisL1-mrna-15571 ... nbisL1-mrna-5509, nbisL1-mrna-6002, nbisL1-mrna-6801
Rhizophoraceae	Rhizophora mangle	6	nbisL1-mrna-11673, nbisL1-mrna-12609, nbisL1-mrna-16958 ... nbisL1-mrna-23226, nbisL1-mrna-3117, nbisL1-mrna-7200
Salicaceae	Populus euphratica	7	populus_peu00412, populus_peu08904, populus_peu10213 ... populus_peu17477, populus_peu18325, populus_peu23533, populus_peu38160
Solanaceae	Lycium barbarum	7	gene-LOC132599152, gene-LOC132606140, gene-LOC132617472 ... gene-LOC132622741, gene-LOC132623118, gene-LOC132627703, gene-LOC132628460
Solanaceae	Solanum chilense	6	SOLCI001905700, SOLCI002695300, SOLCI004538500 ... SOLCI006129800, SOLCI006662200, SOLCI007500100
Solanaceae	Solanum pennellii	8	gene-LOC107001691, gene-LOC107007747, gene-LOC107008480 ... gene-LOC107008778, gene-LOC107013108, gene-LOC107014006, gene-LOC107021561, gene-LOC107032002
Tamaricaceae	Reaumuria soongarica	4	STRG.24890_chr08_-, STRG.8825_chr03_-, STRG.9389_chr03_+ ... gene_16674
Tamaricaceae	Tamarix chinensis	5	TC05G2826, TC06G0312, TC07G1163, TC11G0556, TC11G1182
Zosteraceae	Zostera marina	2	Zosma02g00250.v3.1, Zosma05g20490.v3.1