halophFGD

Basic Information

Locus ID: Ag9G00806

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: Serine threonine-protein kinase-like protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr9	73295288	73297267	-	Ag9G00806

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.61	55,582.72 Da	49.38	83.27	-0.47

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	52	333	1.6E-38	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	26	335	1.24E-68	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	144	343	8.5E-52	-
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	21	143	1.8E-23	-
SMART	SM00220	serkin_6	49	338	1.5E-26	IPR000719
ProSiteProfiles	PS50011	Protein kinase domain profile.	49	348	34.039631	IPR000719
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	55	77	-	IPR017441
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	186	198	-	IPR008271
PRINTS	PR00109	Tyrosine kinase catalytic domain signature	141	154	4.1E-9	IPR001245
PRINTS	PR00109	Tyrosine kinase catalytic domain signature	249	271	4.1E-9	IPR001245
PRINTS	PR00109	Tyrosine kinase catalytic domain signature	180	198	4.1E-9	IPR001245
MobiDBLite	mobidb-lite	consensus disorder prediction	440	460	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	78	97	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	23	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	29	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	446	460	-	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K04730 (interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G51990.1	Protein kinase superfamily protein.
RefSeq	XP_017254579.1	PREDICTED: serine/threonine-protein kinase-like protein At3g51990 [Daucus carota subsp. sativus]
Swiss-Prot	Q9SV05	Serine/threonine-protein kinase-like protein At3g51990 OS=Arabidopsis thaliana OX=3702 GN=At3g51990 PE=2 SV=1
TrEMBL	A0A164VFK2	Protein kinase domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_022367 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	6.371771	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	7.192936	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	7.337739	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	8.306124	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	11.19682	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	9.225392	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	6.766518	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	4.753717	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	20.314739	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	24.123486	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	27.211525	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	24.190197	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	18.095045	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	19.330019	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	9.779069	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	9.34978	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	11.918882	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	15.85312	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	10.265126	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	14.735128	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	15.344625	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	11.043094	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	10.973948	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	11.904631	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	11.483735	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	17.917011	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	16.696474	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	11.603043	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	16.385307	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	9.12354		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	9.415992		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	7.74905		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	30.953009		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	16.769081		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	26.726431		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	21.467274		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	11.109399		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	17.61306		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	19.434351	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	15.922218	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	10.538586	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	16.85322	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	16.16995	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	19.07354	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	17.94931	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	17.089592	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	17.7019	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	10.109933	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	8.774374	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	9.968678	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	4	jg21370, jg26643, jg29003, jg30076
Aizoaceae	Mesembryanthemum crystallinum	3	gene_13405, gene_1472, gene_17559
Amaranthaceae	Atriplex hortensis	2	Ah023749, Ah035671
Amaranthaceae	Beta vulgaris	2	BVRB_1g008140, BVRB_2g028790
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg21719, Sbi_jg22098, Sbi_jg4147, Sbi_jg49657
Amaranthaceae	Salicornia europaea	2	Seu_jg16024, Seu_jg5603
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00001007, GOSA_00008643
Amaranthaceae	Suaeda glauca	5	Sgl10546, Sgl15798, Sgl15799, Sgl62956, Sgl67596
Amaranthaceae	Chenopodium album	5	gene:ENSEOMG00000015139, gene:ENSEOMG00000016654 ... gene:ENSEOMG00000023234, gene:ENSEOMG00000035801, gene:ENSEOMG00000048616
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.1AG0010960, CQ.Regalona.r1.1BG0014910 ... CQ.Regalona.r1.2AG0017390, CQ.Regalona.r1.2BG0019160
Apiaceae	Apium graveolens	3	Ag3G00061, Ag6G01877, Ag9G00806
Arecaceae	Cocos nucifera	4	COCNU_02G017770, COCNU_13G003690, scaffold003122G000010 ... scaffold005510G000010
Arecaceae	Phoenix dactylifera	4	gene-LOC103697866, gene-LOC103723731, gene-LOC103723825 ... gene-LOC120108027
Asteraceae	Flaveria trinervia	4	Ftri10G11417, Ftri12G13775, Ftri14G20618, Ftri4G00602
Brassicaceae	Arabidopsis thaliana	3	AT1G28390.2, AT3G51990.1, AT5G23170.1
Brassicaceae	Eutrema salsugineum	3	Thhalv10004540m.g.v1.0, Thhalv10007568m.g.v1.0 ... Thhalv10011161m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp1g24660.v2.2, Sp2g23960.v2.2, Sp5g10280.v2.2
Brassicaceae	Brassica nigra	3	BniB02g076440.2N, BniB03g017030.2N, BniB08g066290.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq03G1231, Ceq05G0815, Ceq09G0423
Casuarinaceae	Casuarina glauca	3	Cgl03G1336, Cgl05G0825, Cgl09G0461
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno04g06390, gene.Cymno04g12290, gene.Cymno05g07010 ... gene.Cymno09g04180
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate04g12860, gene.Thate06g05310, gene.Thate06g22190
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-1809, nbisL1-mrna-8778
Nitrariaceae	Nitraria sibirica	3	evm.TU.LG03.107, evm.TU.LG06.1558, evm.TU.LG08.807
Plantaginaceae	Plantago ovata	4	Pov_00001974, Pov_00009154, Pov_00015130, Pov_00039329
Plumbaginaceae	Limonium bicolor	4	Lb1G02048, Lb1G04811, Lb4G23414, Lb4G25487
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_1AG0004420, gene-QOZ80_1BG0052820 ... gene-QOZ80_5AG0374850, gene-QOZ80_5BG0421440
Poaceae	Hordeum vulgare	2	HORVU.MOREX.r3.1HG0058730.1.CDS1 ... HORVU.MOREX.r3.3HG0255960.1.CDS1
Poaceae	Lolium multiflorum	3	gene-QYE76_013599, gene-QYE76_052275, gene-QYE76_052350
Poaceae	Oryza coarctata	3	Oco01G007460, Oco02G007760, Oco10G008710
Poaceae	Oryza sativa	2	LOC_Os01g16230.1, LOC_Os05g32170.1
Poaceae	Paspalum vaginatum	2	gene-BS78_03G113900, gene-BS78_09G130000
Poaceae	Puccinellia tenuiflora	2	Pt_Chr0603797, Pt_Chr0603877
Poaceae	Sporobolus alterniflorus	8	Chr01G021380, Chr02G026750, Chr03G001450, Chr05G004470 ... Chr08G003650, Chr0G003980, Chr18G008030, Chr22G009540
Poaceae	Thinopyrum elongatum	2	Tel1E01G401700, Tel3E01G319800
Poaceae	Triticum dicoccoides	4	gene_TRIDC1AG036500, gene_TRIDC1BG041540 ... gene_TRIDC3AG025630, gene_TRIDC3BG029410
Poaceae	Triticum aestivum	5	TraesCS1A02G242100.1.cds1, TraesCS1D02G242000.1 ... TraesCS3A02G184400.1.cds1, TraesCS3B02G214300.1.cds1, TraesCS3D02G188500.1.cds1
Poaceae	Zea mays	5	Zm00001eb128070_P001, Zm00001eb286990_P001 ... Zm00001eb308360_P001, Zm00001eb333110_P002, Zm00001eb347060_P001
Poaceae	Zoysia japonica	4	nbis-gene-14577, nbis-gene-23707, nbis-gene-24514 ... nbis-gene-32497
Poaceae	Zoysia macrostachya	4	Zma_g26779, Zma_g28167, Zma_g7365, Zma_g9688
Portulacaceae	Portulaca oleracea	4	evm.TU.LG04.1863, evm.TU.LG06.491, evm.TU.LG16.1633 ... evm.TU.LG26.33
Posidoniaceae	Posidonia oceanica	3	gene.Posoc01g13720, gene.Posoc01g28530, gene.Posoc04g17530
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.Scaffold_7_RagTag.294, evm.TU.Scaffold_7_RagTag.941 ... evm.TU.Scaffold_8_RagTag.1432
Rhizophoraceae	Carallia pectinifolia	4	nbisL1-mrna-18951, nbisL1-mrna-19431, nbisL1-mrna-3744 ... nbisL1-mrna-8524
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-10914, nbisL1-mrna-10915, nbisL1-mrna-16159 ... nbisL1-mrna-18053
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-15233, nbisL1-mrna-6774, nbisL1-mrna-7000
Rhizophoraceae	Kandelia candel	3	add.evm.TU.utg000002l.279, add.evm.TU.utg000018l.74 ... add.evm.TU.utg000028l.81
Rhizophoraceae	Kandelia obovata	3	Maker00003761, Maker00010354, Maker00010608
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-20260, nbisL1-mrna-20523, nbisL1-mrna-22006
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-10186, nbisL1-mrna-18803, nbisL1-mrna-20185
Salicaceae	Populus euphratica	7	populus_peu01915, populus_peu08275, populus_peu14392 ... populus_peu33297, populus_peu33304, populus_peu35897, populus_peu35898
Solanaceae	Lycium barbarum	3	gene-LOC132598667, gene-LOC132627598, gene-LOC132644820
Solanaceae	Solanum chilense	3	SOLCI003070100, SOLCI004089400, SOLCI005947400
Solanaceae	Solanum pennellii	2	gene-LOC107008245, gene-LOC107015640
Tamaricaceae	Reaumuria soongarica	3	STRG.2073_chr01_+, STRG.5869_chr02_-, gene_11034
Tamaricaceae	Tamarix chinensis	3	TC01G0088, TC03G2988, TC04G0226
Zosteraceae	Zostera marina	3	Zosma01g07300.v3.1, Zosma01g39370.v3.1, Zosma01g42830.v3.1