HalophFGD

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Basic Information
Locus ID: Ag9G00774
Species & Taxonomic ID: Apium graveolens & 4045
Genome Assembly: GCA_009905375.1
Description: FAD binding domain containing protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr9 64968510 64971064 - Ag9G00774
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.02 65,066.67 Da 33.74 84.62 -0.20
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF04030 D-arabinono-1,4-lactone oxidase 406 535 2.5E-9 IPR007173
Pfam PF01565 FAD binding domain 68 200 3.8E-17 IPR006094
SUPERFAMILY SSF56176 FAD-binding/transporter-associated domain-like 56 240 5.61E-33 IPR036318
Gene3D G3DSA:3.30.465.10 - 121 240 4.6E-32 IPR016169
TIGRFAM TIGR01677 pln_FAD_oxido: plant-specific FAD-dependent oxidoreductase 32 584 3.5E-262 IPR010030
ProSiteProfiles PS51387 PCMH-type FAD-binding domain profile. 54 241 19.476616 IPR016166
Gene Ontology
Molecular Function:
GO:0003885 (D-arabinono-1,4-lactone oxidase activity) GO:0016491 (oxidoreductase activity) GO:0050660 (flavin adenine dinucleotide binding) GO:0071949 (FAD binding)
Cellular Component:
GO:0016020 (membrane)
Best hit
Source Best Hit ID Description E-value
TAIR AT2G46760.1 D-arabinono-1,4-lactone oxidase family protein. 0
RefSeq XP_017256432.1 PREDICTED: probable L-gulonolactone oxidase 6 [Daucus carota subsp. sativus] 0
Swiss-Prot O81032 Probable L-gulonolactone oxidase 6 OS=Arabidopsis thaliana OX=3702 GN=GULLO6 PE=3 SV=1 0
TrEMBL A0A164VGB4 L-gulonolactone oxidase OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_022331 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
PRJNA723697SRX106922520.481659Shengqin NO.2seedS1-1S1-1initial formation stage (S1)
PRJNA723697SRX106922541.122342Shengqin NO.2seedS1-3S1-3initial formation stage (S1)
PRJNA723697SRX1069225537.876522Shengqin NO.2seedS3-1S3-1middle development stage (S3)
PRJNA723697SRX1069225621.737766Shengqin NO.2seedS3-2S3-2middle development stage (S3)
PRJNA723697SRX1069225716.820412Shengqin NO.2seedS3-3S3-3middle development stage (S3)
PRJNA723697SRX106922584.455079Shengqin NO.2seedS5-1S5-1maturation stage (S5)
PRJNA723697SRX1069225910.570318Shengqin NO.2seedS5-2S5-2maturation stage (S5)
PRJNA723697SRX106922601.305118Shengqin NO.2seedS5-3S5-3maturation stage (S5)
PRJNA884666SRX177292728.332691celeryantherW99A-r1male sterile line 
PRJNA884666SRX177292738.19347celeryantherW99A-r2male sterile line 
PRJNA884666SRX177292749.687264celeryantherW99A-r3male sterile line 
PRJNA884666SRX177292756.003449celeryantherW99B-r1maintainer line
PRJNA884666SRX177292765.721839celeryantherW99B-r2maintainer line
PRJNA884666SRX177292777.503798celeryantherW99B-r3maintainer line
PRJNA884180SRX177438890.227317var. secalinum YablochnycollenchymaCol_S1_rep1-1
PRJNA884180SRX177480560.324885var. secalinum YablochnycollenchymaCol_S1_rep3biological replicate 3
PRJNA884180SRX177480571.033674var. secalinum YablochnycollenchymaCol_S1_rep4biological replicate 4
PRJNA884180SRX177486782.793532var. secalinum YablochnyparenchymaPar_S1_rep1Biological replicate 1
PRJNA884180SRX177486790.351818var. secalinum YablochnyparenchymaPar_S1_rep2Biological replicate 2
PRJNA884180SRX177486802.856319var. secalinum YablochnyparenchymaPar_S1_rep3Biological replicate 3
PRJNA884180SRX177486813.717079var. secalinum YablochnyparenchymaPar_S1_rep4Biological replicate 4
PRJNA884180SRX177488986.445068var. secalinum Yablochnyvascular bundleVas_S1_rep1Biological replicate 1
PRJNA884180SRX177488999.917496var. secalinum Yablochnyvascular bundleVas_S1_rep2Biological replicate 2
PRJNA884180SRX177489008.466541var. secalinum Yablochnyvascular bundleVas_S1_rep3Biological replicate 3
PRJNA884180SRX177489014.413976var. secalinum Yablochnyvascular bundleVas_S1_rep4Biological replicate 4
PRJNA884180SRX177491299.140131var. secalinum Yablochnypart of the celery petiole without collenchyma strandsCollenchyma-free_S1_rep1Biological replicate 1
PRJNA884180SRX177491302.476481var. secalinum Yablochnypart of the celery petiole without collenchyma strandsCollenchyma-free_S1_rep2Biological replicate 2
PRJNA884180SRX177491312.884506var. secalinum Yablochnypart of the celery petiole without collenchyma strandsCollenchyma-free_S1_rep3Biological replicate 3
PRJNA884180SRX177491324.258822var. secalinum Yablochnypart of the celery petiole without collenchyma strandsCollenchyma-free_S1_rep4Biological replicate 4
PRJNA1124269SRX249364110.036581leafCK1replicate=biological replicate1
PRJNA1124269SRX249364120.090604leafCK2replicate=biological replicate2
PRJNA1124269SRX249364130.162939leafCK3replicate=biological replicate3
PRJNA1124269SRX249364140.502914leafD1replicate=biological replicate1
PRJNA1124269SRX249364150.351324leafD2replicate=biological replicate2
PRJNA1124269SRX249364160.538686leafD3replicate=biological replicate3
PRJNA1124269SRX249364170leafMD1replicate=biological replicate1
PRJNA1124269SRX249364180leafMD2replicate=biological replicate2
PRJNA1124269SRX249364190leafMD3replicate=biological replicate3
PRJNA387092SRX28333091.684003shanghaihuangxinleafleaves between 0.5 and 1 cm in breadth, folded;stage 2
PRJNA387092SRX28333211.266498shanghaihuangxinleafleaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sionstage 5
PRJNA387092SRX28333230.839456shanghaihuangxinleafleaves >3 cm, unfolded, with clearstem extensionstage 7
PRJNA543957SRX58795980.053778Zhangzhou lvqingstemSe3100 ppm Na2SeO4
PRJNA543957SRX58795990.386734Zhangzhou lvqingstemSe2100 ppm Na2SeO4
PRJNA543957SRX58796000.210232Zhangzhou lvqingstemMock2mock
PRJNA543957SRX58796010.828663Zhangzhou lvqingstemMock1mock
PRJNA543957SRX58796020Zhangzhou lvqingstemSe1100 ppm Na2SeO4
PRJNA543957SRX58796034.542758Zhangzhou lvqingstemMock3mock
PRJNA609149SRX78159170.813161Jinnan Shiqinflower budearly flower budearly flower bud
PRJNA609149SRX78159181.233999Jinnan Shiqinflower budmiddle flower budmiddle flower bud
PRJNA609149SRX78159191.074824Jinnan Shiqinflower budearly flowering periodearly flowering period
Network
🔍 Co-expression Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 5 jg15655, jg15656, jg15657, jg4530, jg7876
Aizoaceae Mesembryanthemum crystallinum 6 gene_13239, gene_15406, gene_23497, gene_23498, gene_23499 ...
gene_2437
Amaranthaceae Atriplex hortensis 7 Ah004207, Ah020020, Ah020025, Ah020027, Ah020028, Ah022780 ...
Ah034948
Amaranthaceae Beta vulgaris 7 BVRB_1g002270, BVRB_1g002280, BVRB_2g032020, BVRB_5g101310 ...
BVRB_5g101330, BVRB_6g133650, BVRB_9g210020
Amaranthaceae Salicornia bigelovii 17 Sbi_jg15932, Sbi_jg17361, Sbi_jg20981, Sbi_jg3831 ...
Sbi_jg3833, Sbi_jg38603, Sbi_jg40901, Sbi_jg49078, Sbi_jg49079, Sbi_jg57523, Sbi_jg57845, Sbi_jg58954, Sbi_jg59870, Sbi_jg61078, Sbi_jg62006, Sbi_jg62008, Sbi_jg62009
Amaranthaceae Salicornia europaea 6 Seu_jg16672, Seu_jg24128, Seu_jg24129, Seu_jg6162, Seu_jg626 ...
Seu_jg6163
Amaranthaceae Suaeda aralocaspica 4 GOSA_00000653, GOSA_00000654, GOSA_00001588, GOSA_00018217
Amaranthaceae Suaeda glauca 10 Sgl10825, Sgl10827, Sgl10828, Sgl16179, Sgl16181, Sgl16182 ...
Sgl51510, Sgl56796, Sgl62238, Sgl66783
Amaranthaceae Chenopodium album 5 gene:ENSEOMG00000015155, gene:ENSEOMG00000015890 ...
gene:ENSEOMG00000021632, gene:ENSEOMG00000034832, gene:ENSEOMG00000034875
Amaranthaceae Chenopodium quinoa 7 CQ.Regalona.r1.1AG0004060, CQ.Regalona.r1.1AG0004080 ...
CQ.Regalona.r1.2AG0015820, CQ.Regalona.r1.2BG0017850, CQ.Regalona.r1.2BG0026860, CQ.Regalona.r1.3AG0013140, CQ.Regalona.r1.3BG0013110
Anacardiaceae Pistacia vera 3 pistato.v30006460, pistato.v30006470, pistato.v30253600
Apiaceae Apium graveolens 3 Ag6G01305, Ag9G00774, Ag9G00775
Arecaceae Cocos nucifera 5 COCNU_05G000380, COCNU_06G004950, COCNU_08G005850 ...
COCNU_08G005870, COCNU_14G003600
Arecaceae Phoenix dactylifera 3 gene-LOC103696384, gene-LOC103706838, gene-LOC103707507
Asparagaceae Asparagus officinalis 6 AsparagusV1_01.460.V1.1, AsparagusV1_03.2483.V1.1 ...
AsparagusV1_04.1097.V1.1, AsparagusV1_07.1174.V1.1, AsparagusV1_08.1522.V1.1, AsparagusV1_Unassigned.1157.V1.1
Asteraceae Flaveria trinervia 2 Ftri11G14758, Ftri5G02048
Brassicaceae Arabidopsis thaliana 7 AT1G32300.1, AT2G46740.1, AT2G46750.1, AT2G46760.1 ...
AT5G11540.1, AT5G56470.1, AT5G56490.1
Brassicaceae Eutrema salsugineum 5 Thhalv10001364m.g.v1.0, Thhalv10001763m.g.v1.0 ...
Thhalv10002773m.g.v1.0, Thhalv10002834m.g.v1.0, Thhalv10013068m.g.v1.0
Brassicaceae Schrenkiella parvula 7 Sp3g21360.v2.2, Sp4g28770.v2.2, Sp4g28780.v2.2 ...
Sp4g28790.v2.2, Sp6g18280.v2.2, Sp6g18290.v2.2, Sp6g32060.v2.2
Brassicaceae Brassica nigra 8 BniB02g035460.2N, BniB02g050470.2N, BniB02g050500.2N ...
BniB02g050530.2N, BniB02g066600.2N, BniB05g026010.2N, BniB05g036200.2N, BniS02554g220.2N
Casuarinaceae Casuarina equisetifolia 13 Ceq01G1707, Ceq01G2201, Ceq01G2205, Ceq01G2206, Ceq01G2207 ...
Ceq01G2208, Ceq01G2209, Ceq01G2214, Ceq01G2215, Ceq04G1270, Ceq04G2102, Ceq08G1600, Ceq08G1604
Casuarinaceae Casuarina glauca 7 Cgl01G1164, Cgl01G1863, Cgl01G2486, Cgl01G2488, Cgl01G2496 ...
Cgl04G1431, Cgl04G2297
Cymodoceaceae Cymodocea nodosa 3 gene.Cymno06g00580, gene.Cymno12g02590, gene.Cymno14g02070
Dunaliellaceae Dunaliella salina 2 Dusal.0016s00043.v1.0, Dusal.0050s00014.v1.0
Hydrocharitaceae Thalassia testudinum 4 gene.Thate02g30870, gene.Thate03g16170, gene.Thate04g05230 ...
gene.Thate04g05240
Nitrariaceae Nitraria sibirica 4 evm.TU.LG04.625, evm.TU.LG04.626, evm.TU.LG04.627 ...
evm.TU.LG07.791
Plantaginaceae Plantago ovata 4 Pov_00013642, Pov_00032795, Pov_00034293, Pov_00034294
Plumbaginaceae Limonium bicolor 10 Lb0G37995, Lb1G05235, Lb2G11701, Lb2G11707, Lb2G11708 ...
Lb2G11710, Lb2G11711, Lb2G11712, Lb2G15176, Lb2G15177
Poaceae Echinochloa crus-galli 21 AH01.1531, AH05.2155, AH07.1262, AH07.1275, AH07.1292 ...
AH07.233, AH08.1260, AH08.127, BH01.1732, BH01.2252, BH05.2285, BH07.1353, BH07.293, BH08.78, CH01.1807, CH03.4620, CH05.2371, CH05.2718, CH07.1067, CH08.114, CH08.372
Poaceae Eleusine coracana subsp. coracana 18 gene-QOZ80_1AG0005960, gene-QOZ80_1BG0054710 ...
gene-QOZ80_2AG0109570, gene-QOZ80_2BG0163120, gene-QOZ80_3AG0225470, gene-QOZ80_3BG0271030, gene-QOZ80_7AG0559350, gene-QOZ80_7BG0587720, gene-QOZ80_7BG0590650, gene-QOZ80_8AG0623160, gene-QOZ80_8AG0623190, gene-QOZ80_8AG0627440, gene-QOZ80_8BG0650910, gene-QOZ80_8BG0650920, gene-QOZ80_8BG0650960, gene-QOZ80_8BG0652280, gene-QOZ80_8BG0654930, gene-QOZ80_8BG0654940
Poaceae Hordeum vulgare 11 HORVU.MOREX.r3.1HG0021430.1.CDS1 ...
HORVU.MOREX.r3.1HG0062980.1.CDS1, HORVU.MOREX.r3.2HG0100370.1, HORVU.MOREX.r3.3HG0315590.1.CDS1, HORVU.MOREX.r3.3HG0322550.1, HORVU.MOREX.r3.4HG0416920.1, HORVU.MOREX.r3.5HG0500360.1.CDS1, HORVU.MOREX.r3.6HG0551380.1, HORVU.MOREX.r3.6HG0568910.1, HORVU.MOREX.r3.7HG0676830.1.CDS1, HORVU.MOREX.r3.7HG0704810.1
Poaceae Lolium multiflorum 11 gene-QYE76_000060, gene-QYE76_004728, gene-QYE76_016907 ...
gene-QYE76_029638, gene-QYE76_031728, gene-QYE76_033359, gene-QYE76_033360, gene-QYE76_033371, gene-QYE76_033377, gene-QYE76_038284, gene-QYE76_067208
Poaceae Oryza coarctata 8 Oco01G017660, Oco03G001350, Oco03G001360, Oco04G001230 ...
Oco05G016930, Oco06G017700, Oco15G000700, Oco20G007840
Poaceae Oryza sativa 8 LOC_Os01g49360.1, LOC_Os02g03200.1, LOC_Os02g03210.1 ...
LOC_Os03g36530.1, LOC_Os04g29090.1, LOC_Os04g29210.1, LOC_Os08g02230.1, LOC_Os08g40720.1
Poaceae Paspalum vaginatum 5 gene-BS78_01G171400, gene-BS78_03G162800 ...
gene-BS78_04G020100, gene-BS78_04G122800, gene-BS78_07G019000
Poaceae Puccinellia tenuiflora 11 Pt_Chr0305771, Pt_Chr0305772, Pt_Chr0305819, Pt_Chr0305821 ...
Pt_Chr0307029, Pt_Chr0307031, Pt_Chr0402633, Pt_Chr0402638, Pt_Chr0502129, Pt_Chr0603757, Pt_Chr0603842
Poaceae Sporobolus alterniflorus 12 Chr01G009070, Chr03G009160, Chr04G016690, Chr06G022240 ...
Chr08G009380, Chr08G009660, Chr08G009670, Chr09G000560, Chr12G028060, Chr20G009950, Chr20G012710, Chr29G012620
Poaceae Thinopyrum elongatum 23 Tel1E01G183600, Tel1E01G420200, Tel3E01G748900 ...
Tel3E01G749000, Tel3E01G810800, Tel4E01G589400, Tel4E01G627400, Tel4E01G632500, Tel4E01G641000, Tel4E01G647300, Tel4E01G647400, Tel5E01G193000, Tel5E01G193100, Tel5E01G523700, Tel6E01G187300, Tel6E01G307400, Tel7E01G251200, Tel7E01G417100, Tel7E01G546100, Tel7E01G546400, Tel7E01G547000, Tel7E01G547100, Tel7E01G706100
Poaceae Triticum dicoccoides 39 gene_TRIDC1AG015780, gene_TRIDC1AG037740 ...
gene_TRIDC1AG037830, gene_TRIDC1BG043270, gene_TRIDC1BG043340, gene_TRIDC2AG004050, gene_TRIDC2AG015520, gene_TRIDC2BG004640, gene_TRIDC3BG080160, gene_TRIDC4BG060170, gene_TRIDC4BG060180, gene_TRIDC4BG060190, gene_TRIDC4BG060270, gene_TRIDC4BG063100, gene_TRIDC4BG063110, gene_TRIDC4BG063720, gene_TRIDC5AG014710, gene_TRIDC5AG048600, gene_TRIDC5AG074930, gene_TRIDC5AG076380, gene_TRIDC5AG076390, gene_TRIDC5AG078170, gene_TRIDC5BG017040, gene_TRIDC5BG052550, gene_TRIDC5BG052560, gene_TRIDC6AG010030, gene_TRIDC6AG020440, gene_TRIDC6BG015080, gene_TRIDC6BG026370, gene_TRIDC7AG015770, gene_TRIDC7AG029900, gene_TRIDC7AG044440, gene_TRIDC7AG044450, gene_TRIDC7AG058660, gene_TRIDC7BG005180, gene_TRIDC7BG020640, gene_TRIDC7BG035820, gene_TRIDC7BG035870, gene_TRIDC7BG051380
Poaceae Triticum aestivum 56 TraesCS1A02G103200.1.cds1, TraesCS1A02G252200.1.cds1 ...
TraesCS1B02G265100.1.cds1, TraesCS1B02G265800.1, TraesCS1D02G001600.1, TraesCS1D02G095600.1, TraesCS1D02G251900.1.cds1, TraesCS1D02G252600.1.cds1, TraesCS2A02G038100.1.cds1, TraesCS2A02G126000.1, TraesCS2D02G037100.1.cds1, TraesCS3A02G494700.1, TraesCS3B02G556400.1, TraesCS4B02G359500.1, TraesCS4B02G359600.1, TraesCS4B02G359700.1, TraesCS4B02G359800.1, TraesCS4B02G387900.1, TraesCS4B02G392300.1, TraesCS4D02G353100.1, TraesCS4D02G353500.1, TraesCS5A02G097600.1.cds1, TraesCS5A02G329500.1.cds1, TraesCS5A02G538800.1.cds1, TraesCS5A02G538900.1, TraesCS5A02G539000.1, TraesCS5A02G539100.1, TraesCS5B02G103100.1, TraesCS5B02G329600.1.cds1, TraesCS5B02G329700.1.cds1, TraesCS5D02G109900.1, TraesCS5D02G335300.1.cds1, TraesCS6A02G082500.1, TraesCS6A02G148000.1, TraesCS6B02G109800.1, TraesCS6B02G176300.1, TraesCS6D02G075800.1, TraesCS6D02G137300.1, TraesCS6D02G328200.1, TraesCS7A02G133700.1, TraesCS7A02G232400.1.cds1, TraesCS7A02G317500.1, TraesCS7A02G421500.1, TraesCS7B02G034800.1.cds1, TraesCS7B02G130800.1.cds1, TraesCS7B02G218900.1, TraesCS7B02G321800.1.cds1, TraesCS7D02G133300.1.cds1, TraesCS7D02G232500.1.cds1, TraesCS7D02G314200.1, TraesCSU02G034500.1, TraesCSU02G093500.1, TraesCSU02G116200.1, TraesCSU02G116300.1, TraesCSU02G124800.1, TraesCSU02G236900.1
Poaceae Zea mays 5 Zm00001eb030340_P001, Zm00001eb043120_P001 ...
Zm00001eb173900_P001, Zm00001eb219950_P001, Zm00001eb236880_P001
Poaceae Zoysia japonica 8 nbis-gene-21488, nbis-gene-30068, nbis-gene-39524 ...
nbis-gene-43251, nbis-gene-50986, nbis-gene-51275, nbis-gene-51907, nbis-gene-56464
Poaceae Zoysia macrostachya 7 Zma_g10436, Zma_g12590, Zma_g14868, Zma_g22376, Zma_g22659 ...
Zma_g22856, Zma_g837
Portulacaceae Portulaca oleracea 6 evm.TU.LG04.2099, evm.TU.LG06.216, evm.TU.LG07.666 ...
evm.TU.LG15.275, evm.TU.LG19.1328, evm.TU.LG24.1322
Posidoniaceae Posidonia oceanica 4 gene.Posoc02g11800, gene.Posoc03g27910, gene.Posoc06g08530 ...
gene.Posoc09g07360
Rhizophoraceae Bruguiera sexangula 3 evm.TU.Scaffold_4_RagTag.1194, evm.TU.Scaffold_5_RagTag.675 ...
evm.TU.Scaffold_5_RagTag.676
Rhizophoraceae Carallia pectinifolia 6 nbisL1-mrna-10676, nbisL1-mrna-10677, nbisL1-mrna-10678 ...
nbisL1-mrna-10679, nbisL1-mrna-10680, nbisL1-mrna-27359
Rhizophoraceae Ceriops tagal 2 nbisL1-mrna-19341, nbisL1-mrna-20656
Rhizophoraceae Ceriops zippeliana 2 nbisL1-mrna-11316, nbisL1-mrna-1270
Rhizophoraceae Kandelia candel 3 evm.TU.utg000006l.646, evm.TU.utg000006l.647 ...
evm.TU.utg000008l.756
Rhizophoraceae Kandelia obovata 2 Maker00000932, Maker00013926
Rhizophoraceae Rhizophora apiculata 3 nbisL1-mrna-10203, nbisL1-mrna-10204, nbisL1-mrna-9725
Rhizophoraceae Rhizophora mangle 3 nbisL1-mrna-1004, nbisL1-mrna-7312, nbisL1-mrna-7313
Salicaceae Populus euphratica 3 populus_peu04888, populus_peu31485, populus_peu31486
Solanaceae Lycium barbarum 4 gene-LOC132630585, gene-LOC132630849, gene-LOC132630857 ...
gene-LOC132635636
Solanaceae Solanum chilense 1 SOLCI005600000
Solanaceae Solanum pennellii 2 gene-LOC107027329, gene-LOC107029833
Tamaricaceae Reaumuria soongarica 3 STRG.26586_chr11_+, STRG.32817_chr09_+, gene_15828
Tamaricaceae Tamarix chinensis 4 TC02G0353, TC03G2060, TC09G2373, TC09G2374
Zosteraceae Zostera marina 9 Zosma03g27690.v3.1, Zosma03g27700.v3.1, Zosma06g01770.v3.1 ...
Zosma06g24230.v3.1, Zosma06g24240.v3.1, Zosma06g24310.v3.1, Zosma06g24320.v3.1, Zosma06g24330.v3.1, Zosma06g24540.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.