Basic Information
Locus ID:
Ag9G00619
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
Multiple C2 and transmembrane domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 28889568 | 28893077 | + | Ag9G00619 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.06 | 117,835.08 Da | 52.13 | 81.71 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04022 | C2A_MCTP_PRT_plant | 22 | 152 | 1.29514E-57 | - |
| CDD | cd04019 | C2C_MCTP_PRT_plant | 466 | 612 | 2.69832E-58 | - |
| CDD | cd08378 | C2B_MCTP_PRT_plant | 308 | 434 | 3.50171E-48 | - |
| CDD | cd08379 | C2D_MCTP_PRT_plant | 624 | 751 | 6.47709E-64 | - |
| Pfam | PF00168 | C2 domain | 465 | 574 | 2.0E-7 | IPR000008 |
| Pfam | PF08372 | Plant phosphoribosyltransferase C-terminal | 880 | 1035 | 2.8E-72 | IPR013583 |
| Pfam | PF00168 | C2 domain | 308 | 409 | 2.4E-5 | IPR000008 |
| Pfam | PF00168 | C2 domain | 623 | 734 | 1.7E-24 | IPR000008 |
| Pfam | PF00168 | C2 domain | 22 | 114 | 6.9E-19 | IPR000008 |
| SUPERFAMILY | SSF49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | 623 | 775 | 1.99E-26 | IPR035892 |
| SUPERFAMILY | SSF49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | 18 | 152 | 4.27E-25 | IPR035892 |
| SUPERFAMILY | SSF49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | 308 | 450 | 1.49E-12 | IPR035892 |
| SUPERFAMILY | SSF49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | 465 | 614 | 1.3E-17 | IPR035892 |
| Gene3D | G3DSA:2.60.40.150 | C2 domain | 451 | 593 | 1.3E-9 | IPR035892 |
| Gene3D | G3DSA:2.60.40.150 | C2 domain | 607 | 755 | 5.4E-24 | IPR035892 |
| Gene3D | G3DSA:2.60.40.150 | C2 domain | 294 | 431 | 1.6E-10 | IPR035892 |
| Gene3D | G3DSA:2.60.40.150 | C2 domain | 19 | 182 | 9.1E-30 | IPR035892 |
| SMART | SM00239 | C2_3c | 308 | 403 | 6.5E-8 | IPR000008 |
| SMART | SM00239 | C2_3c | 466 | 568 | 2.6 | IPR000008 |
| SMART | SM00239 | C2_3c | 22 | 127 | 1.6E-15 | IPR000008 |
| SMART | SM00239 | C2_3c | 624 | 731 | 1.4E-12 | IPR000008 |
| ProSiteProfiles | PS50004 | C2 domain profile. | 4 | 128 | 19.874056 | IPR000008 |
| ProSiteProfiles | PS50004 | C2 domain profile. | 290 | 409 | 9.889065 | IPR000008 |
| ProSiteProfiles | PS50004 | C2 domain profile. | 606 | 732 | 15.747969 | IPR000008 |
| ProSiteProfiles | PS50004 | C2 domain profile. | 445 | 573 | 11.110558 | IPR000008 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 161 | 178 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 161 | 180 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G74720.1 | C2 calcium/lipid-binding plant phosphoribosyltransferase family protein. Encodes a putative transmembrane protein carrying four C(2) domains, suggesting that QKY may function in membrane trafficking in a Ca(2+)-dependent fashion. Mutant analysis shows that this gene is involved in organ development. | 0 |
| RefSeq | XP_017257772.1 | PREDICTED: protein QUIRKY isoform X1 [Daucus carota subsp. sativus] | 0 |
| B8XCH5 | Protein QUIRKY OS=Arabidopsis thaliana OX=3702 GN=QKY PE=1 SV=1 | 0 | |
| TrEMBL | A0A161YE69 | Protein QUIRKY OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_021536 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| PRJNA723697 | SRX10692252 | 3.760573 | Shengqin NO.2 | seed | S1-1 | S1-1 | initial formation stage (S1) |
| PRJNA723697 | SRX10692254 | 3.918483 | Shengqin NO.2 | seed | S1-3 | S1-3 | initial formation stage (S1) |
| PRJNA723697 | SRX10692255 | 3.193658 | Shengqin NO.2 | seed | S3-1 | S3-1 | middle development stage (S3) |
| PRJNA723697 | SRX10692256 | 3.592092 | Shengqin NO.2 | seed | S3-2 | S3-2 | middle development stage (S3) |
| PRJNA723697 | SRX10692257 | 3.457296 | Shengqin NO.2 | seed | S3-3 | S3-3 | middle development stage (S3) |
| PRJNA723697 | SRX10692258 | 2.071267 | Shengqin NO.2 | seed | S5-1 | S5-1 | maturation stage (S5) |
| PRJNA723697 | SRX10692259 | 1.989852 | Shengqin NO.2 | seed | S5-2 | S5-2 | maturation stage (S5) |
| PRJNA723697 | SRX10692260 | 0.784986 | Shengqin NO.2 | seed | S5-3 | S5-3 | maturation stage (S5) |
| PRJNA884666 | SRX17729272 | 12.110336 | celery | anther | W99A-r1 | male sterile line | |
| PRJNA884666 | SRX17729273 | 12.883327 | celery | anther | W99A-r2 | male sterile line | |
| PRJNA884666 | SRX17729274 | 13.816666 | celery | anther | W99A-r3 | male sterile line | |
| PRJNA884666 | SRX17729275 | 11.094462 | celery | anther | W99B-r1 | maintainer line | |
| PRJNA884666 | SRX17729276 | 12.64104 | celery | anther | W99B-r2 | maintainer line | |
| PRJNA884666 | SRX17729277 | 11.885393 | celery | anther | W99B-r3 | maintainer line | |
| PRJNA884180 | SRX17743889 | 0.234501 | var. secalinum Yablochny | collenchyma | Col_S1_rep1-1 | ||
| PRJNA884180 | SRX17748056 | 2.170199 | var. secalinum Yablochny | collenchyma | Col_S1_rep3 | biological replicate 3 | |
| PRJNA884180 | SRX17748057 | 7.469957 | var. secalinum Yablochny | collenchyma | Col_S1_rep4 | biological replicate 4 | |
| PRJNA884180 | SRX17748678 | 4.033028 | var. secalinum Yablochny | parenchyma | Par_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17748679 | 3.068857 | var. secalinum Yablochny | parenchyma | Par_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17748680 | 4.793929 | var. secalinum Yablochny | parenchyma | Par_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17748681 | 5.768229 | var. secalinum Yablochny | parenchyma | Par_S1_rep4 | Biological replicate 4 | |
| PRJNA884180 | SRX17748898 | 21.238506 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17748899 | 19.663204 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17748900 | 21.044857 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17748901 | 21.492001 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep4 | Biological replicate 4 | |
| PRJNA884180 | SRX17749129 | 9.653151 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17749130 | 6.544028 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17749131 | 8.393428 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17749132 | 8.656115 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep4 | Biological replicate 4 | |
| PRJNA1124269 | SRX24936411 | 1.444166 | leaf | CK1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936412 | 3.343262 | leaf | CK2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936413 | 3.02335 | leaf | CK3 | replicate=biological replicate3 | ||
| PRJNA1124269 | SRX24936414 | 6.057787 | leaf | D1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936415 | 12.204478 | leaf | D2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936416 | 4.831352 | leaf | D3 | replicate=biological replicate3 | ||
| PRJNA1124269 | SRX24936417 | 1.609686 | leaf | MD1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936418 | 2.056268 | leaf | MD2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936419 | 2.084019 | leaf | MD3 | replicate=biological replicate3 | ||
| PRJNA387092 | SRX2833309 | 3.416389 | shanghaihuangxin | leaf | leaves between 0.5 and 1 cm in breadth, folded; | stage 2 | |
| PRJNA387092 | SRX2833321 | 5.338904 | shanghaihuangxin | leaf | leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion | stage 5 | |
| PRJNA387092 | SRX2833323 | 2.176659 | shanghaihuangxin | leaf | leaves >3 cm, unfolded, with clearstem extension | stage 7 | |
| PRJNA543957 | SRX5879598 | 0.854045 | Zhangzhou lvqing | stem | Se3 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879599 | 0.684932 | Zhangzhou lvqing | stem | Se2 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879600 | 0.66414 | Zhangzhou lvqing | stem | Mock2 | mock | |
| PRJNA543957 | SRX5879601 | 1.661284 | Zhangzhou lvqing | stem | Mock1 | mock | |
| PRJNA543957 | SRX5879602 | 0.846791 | Zhangzhou lvqing | stem | Se1 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879603 | 2.487577 | Zhangzhou lvqing | stem | Mock3 | mock | |
| PRJNA609149 | SRX7815917 | 9.204205 | Jinnan Shiqin | flower bud | early flower bud | early flower bud | |
| PRJNA609149 | SRX7815918 | 19.653055 | Jinnan Shiqin | flower bud | middle flower bud | middle flower bud | |
| PRJNA609149 | SRX7815919 | 14.527733 | Jinnan Shiqin | flower bud | early flowering period | early flowering period |
Orthology