Basic Information
Locus ID:
Ag9G00307
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
14-3-3-like protein 16R
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 13165419 | 13168769 | - | Ag9G00307 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.65 | 29,386.57 Da | 43.67 | 83.08 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00244 | 14-3-3 protein | 10 | 235 | 1.0E-102 | IPR023410 |
| SUPERFAMILY | SSF48445 | 14-3-3 protein | 1 | 237 | 1.2E-103 | IPR036815 |
| Gene3D | G3DSA:1.20.190.20 | - | 1 | 248 | 6.9E-130 | IPR036815 |
| SMART | SM00101 | 1433_4 | 4 | 248 | 1.3E-201 | IPR023410 |
| PIRSF | PIRSF000868 | 14-3-3 | 1 | 247 | 5.1E-117 | IPR000308 |
| ProSitePatterns | PS00796 | 14-3-3 proteins signature 1. | 45 | 55 | - | IPR023409 |
| ProSitePatterns | PS00797 | 14-3-3 proteins signature 2. | 217 | 236 | - | IPR023409 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 88 | 112 | 1.3E-86 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 39 | 68 | 1.3E-86 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 208 | 237 | 1.3E-86 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 154 | 180 | 1.3E-86 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 181 | 207 | 1.3E-86 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 119 | 141 | 1.3E-86 | IPR000308 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 260 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 240 | 254 | - | - |
| Coils | Coil | Coil | 138 | 165 | - | - |
| Coils | Coil | Coil | 10 | 30 | - | - |
KEGG Pathway
KO Term:
Pathway:
ko04011 (MAPK signaling pathway - yeast)
map04011 (MAPK signaling pathway - yeast)
ko04110 (Cell cycle)
map04110 (Cell cycle)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78300.1 | general regulatory factor 2. G-box binding factor GF14 omega encoding a 14-3-3 protein | 0 |
| RefSeq | XP_017258714.1 | PREDICTED: 14-3-3-like protein B [Daucus carota subsp. sativus] | 0 |
| Q01525 | 14-3-3-like protein GF14 omega OS=Arabidopsis thaliana OX=3702 GN=GRF2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A161YDG1 | 14_3_3 domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_021876 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| PRJNA723697 | SRX10692252 | 328.034851 | Shengqin NO.2 | seed | S1-1 | S1-1 | initial formation stage (S1) |
| PRJNA723697 | SRX10692254 | 172.002731 | Shengqin NO.2 | seed | S1-3 | S1-3 | initial formation stage (S1) |
| PRJNA723697 | SRX10692255 | 210.72319 | Shengqin NO.2 | seed | S3-1 | S3-1 | middle development stage (S3) |
| PRJNA723697 | SRX10692256 | 209.742203 | Shengqin NO.2 | seed | S3-2 | S3-2 | middle development stage (S3) |
| PRJNA723697 | SRX10692257 | 200.931686 | Shengqin NO.2 | seed | S3-3 | S3-3 | middle development stage (S3) |
| PRJNA723697 | SRX10692258 | 113.460075 | Shengqin NO.2 | seed | S5-1 | S5-1 | maturation stage (S5) |
| PRJNA723697 | SRX10692259 | 138.075455 | Shengqin NO.2 | seed | S5-2 | S5-2 | maturation stage (S5) |
| PRJNA723697 | SRX10692260 | 90.017082 | Shengqin NO.2 | seed | S5-3 | S5-3 | maturation stage (S5) |
| PRJNA884666 | SRX17729272 | 417.663147 | celery | anther | W99A-r1 | male sterile line | |
| PRJNA884666 | SRX17729273 | 406.305511 | celery | anther | W99A-r2 | male sterile line | |
| PRJNA884666 | SRX17729274 | 405.099792 | celery | anther | W99A-r3 | male sterile line | |
| PRJNA884666 | SRX17729275 | 459.410645 | celery | anther | W99B-r1 | maintainer line | |
| PRJNA884666 | SRX17729276 | 429.752472 | celery | anther | W99B-r2 | maintainer line | |
| PRJNA884666 | SRX17729277 | 443.292755 | celery | anther | W99B-r3 | maintainer line | |
| PRJNA884180 | SRX17743889 | 496.277283 | var. secalinum Yablochny | collenchyma | Col_S1_rep1-1 | ||
| PRJNA884180 | SRX17748056 | 613.035828 | var. secalinum Yablochny | collenchyma | Col_S1_rep3 | biological replicate 3 | |
| PRJNA884180 | SRX17748057 | 473.158936 | var. secalinum Yablochny | collenchyma | Col_S1_rep4 | biological replicate 4 | |
| PRJNA884180 | SRX17748678 | 464.515198 | var. secalinum Yablochny | parenchyma | Par_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17748679 | 392.630493 | var. secalinum Yablochny | parenchyma | Par_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17748680 | 447.673828 | var. secalinum Yablochny | parenchyma | Par_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17748681 | 364.160767 | var. secalinum Yablochny | parenchyma | Par_S1_rep4 | Biological replicate 4 | |
| PRJNA884180 | SRX17748898 | 400.178192 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17748899 | 402.761963 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17748900 | 436.080505 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17748901 | 375.602356 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep4 | Biological replicate 4 | |
| PRJNA884180 | SRX17749129 | 426.294464 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17749130 | 500.449432 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17749131 | 299.441589 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17749132 | 437.140137 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep4 | Biological replicate 4 | |
| PRJNA1124269 | SRX24936411 | 60.670025 | leaf | CK1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936412 | 82.45092 | leaf | CK2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936413 | 76.116585 | leaf | CK3 | replicate=biological replicate3 | ||
| PRJNA1124269 | SRX24936414 | 140.52858 | leaf | D1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936415 | 233.417068 | leaf | D2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936416 | 149.751297 | leaf | D3 | replicate=biological replicate3 | ||
| PRJNA1124269 | SRX24936417 | 131.28157 | leaf | MD1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936418 | 73.830963 | leaf | MD2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936419 | 112.834198 | leaf | MD3 | replicate=biological replicate3 | ||
| PRJNA387092 | SRX2833309 | 153.554535 | shanghaihuangxin | leaf | leaves between 0.5 and 1 cm in breadth, folded; | stage 2 | |
| PRJNA387092 | SRX2833321 | 80.620827 | shanghaihuangxin | leaf | leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion | stage 5 | |
| PRJNA387092 | SRX2833323 | 66.784065 | shanghaihuangxin | leaf | leaves >3 cm, unfolded, with clearstem extension | stage 7 | |
| PRJNA543957 | SRX5879598 | 196.047623 | Zhangzhou lvqing | stem | Se3 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879599 | 173.584061 | Zhangzhou lvqing | stem | Se2 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879600 | 115.616623 | Zhangzhou lvqing | stem | Mock2 | mock | |
| PRJNA543957 | SRX5879601 | 100.866043 | Zhangzhou lvqing | stem | Mock1 | mock | |
| PRJNA543957 | SRX5879602 | 217.582001 | Zhangzhou lvqing | stem | Se1 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879603 | 158.643265 | Zhangzhou lvqing | stem | Mock3 | mock | |
| PRJNA609149 | SRX7815917 | 366.471985 | Jinnan Shiqin | flower bud | early flower bud | early flower bud | |
| PRJNA609149 | SRX7815918 | 327.520569 | Jinnan Shiqin | flower bud | middle flower bud | middle flower bud | |
| PRJNA609149 | SRX7815919 | 277.632721 | Jinnan Shiqin | flower bud | early flowering period | early flowering period |
Orthology