halophFGD

Basic Information

Locus ID: Ag9G00142

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: Phragmoplast orienting kinesin

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr9	4798552	4812449	+	Ag9G00142

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.10	320,474.34 Da	50.79	87.86	-0.61

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00225	Kinesin motor domain	201	532	6.6E-111	IPR001752
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	195	565	8.18E-118	IPR027417
Gene3D	G3DSA:3.40.850.10	Kinesin motor domain	190	544	1.2E-136	IPR036961
SMART	SM00129	kinesin_4	193	540	1.9E-161	IPR001752
ProSiteProfiles	PS50067	Kinesin motor domain profile.	195	532	121.314796	IPR001752
ProSiteProfiles	PS50209	CARD caspase recruitment domain profile.	911	981	9.54202	IPR001315
ProSitePatterns	PS00411	Kinesin motor domain signature.	428	439	-	IPR019821
PRINTS	PR00380	Kinesin heavy chain signature	429	447	2.5E-40	IPR001752
PRINTS	PR00380	Kinesin heavy chain signature	267	288	2.5E-40	IPR001752
PRINTS	PR00380	Kinesin heavy chain signature	396	413	2.5E-40	IPR001752
PRINTS	PR00380	Kinesin heavy chain signature	482	503	2.5E-40	IPR001752
MobiDBLite	mobidb-lite	consensus disorder prediction	1403	1417	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1385	1422	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1434	1453	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	2778	2814	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	2423	2452	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	80	131	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	2423	2448	-	-
Coils	Coil	Coil	1851	1871	-	-
Coils	Coil	Coil	1883	1903	-	-
Coils	Coil	Coil	2484	2504	-	-
Coils	Coil	Coil	1028	1048	-	-
Coils	Coil	Coil	2698	2718	-	-
Coils	Coil	Coil	1223	1243	-	-
Coils	Coil	Coil	2208	2228	-	-
Coils	Coil	Coil	2285	2382	-	-
Coils	Coil	Coil	2019	2039	-	-
Coils	Coil	Coil	1307	1355	-	-
Coils	Coil	Coil	909	943	-	-
Coils	Coil	Coil	860	880	-	-
Coils	Coil	Coil	2243	2263	-	-
Coils	Coil	Coil	781	829	-	-
Coils	Coil	Coil	2645	2679	-	-
Coils	Coil	Coil	951	978	-	-
Coils	Coil	Coil	546	566	-	-
Coils	Coil	Coil	2741	2768	-	-
Coils	Coil	Coil	621	655	-	-
Coils	Coil	Coil	2608	2635	-	-
Coils	Coil	Coil	1071	1105	-	-
Coils	Coil	Coil	1170	1204	-	-
Coils	Coil	Coil	2117	2151	-	-
Coils	Coil	Coil	1805	1825	-	-
Coils	Coil	Coil	2580	2600	-	-

Gene Ontology

Biological Process:

GO:0007018 (microtubule-based movement) GO:0042981 (regulation of apoptotic process)

Molecular Function:

GO:0003777 (microtubule motor activity) GO:0005524 (ATP binding) GO:0008017 (microtubule binding)

KEGG Pathway

KO Term:

K10400 (kinesin family member 15)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G19050.1	phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls.
RefSeq	XP_017256133.1	PREDICTED: phragmoplast orienting kinesin 2 [Daucus carota subsp. sativus]
Swiss-Prot	Q27IK6	Kinesin-like protein KIN-12D OS=Arabidopsis thaliana OX=3702 GN=KIN12D PE=2 SV=1
TrEMBL	A0A164VMB9	Kinesin motor domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_022068 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	1.464943	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	0.780511	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	0.654606	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	0.65166	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	0.86841	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	0.686353	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	0.776124	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	0.599063	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	17.020678	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	12.559642	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	15.768968	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	11.796047	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	10.83972	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	7.882774	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	0.965061	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	0.952589	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	2.277361	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	3.836484	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	1.581257	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	1.156499	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	1.556485	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	3.260327	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	2.871045	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	3.864671	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	4.183539	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	3.580549	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	2.970308	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	2.559062	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	3.914216	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	0.2046		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	0.138495		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	0.106624		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	0.301412		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	1.263204		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	0.338581		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	0.068204		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	0		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	0.058076		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	6.998837	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	0.581412	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	0.529059	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	0.154481	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	0.184683	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	0.443808	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	0.658016	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	0.171401	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	0.351985	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	6.003996	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	8.627314	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	6.400799	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	4	jg1050, jg12327, jg28708, jg36061
Aizoaceae	Mesembryanthemum crystallinum	3	gene_21585, gene_5744, gene_5745
Amaranthaceae	Atriplex hortensis	2	Ah010361, Ah027761
Amaranthaceae	Beta vulgaris	2	BVRB_7g171450, BVRB_9g218530
Amaranthaceae	Salicornia bigelovii	6	Sbi_jg1474, Sbi_jg26557, Sbi_jg34007, Sbi_jg35083 ... Sbi_jg39603, Sbi_jg39604
Amaranthaceae	Salicornia europaea	2	Seu_jg15082, Seu_jg3268
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00003438, GOSA_00019691, GOSA_00019692
Amaranthaceae	Suaeda glauca	4	Sgl00036, Sgl05109, Sgl72698, Sgl76237
Amaranthaceae	Chenopodium album	5	gene:ENSEOMG00000007002, gene:ENSEOMG00000018937 ... gene:ENSEOMG00000039830, gene:ENSEOMG00000043440, gene:ENSEOMG00000053043
Amaranthaceae	Chenopodium quinoa	5	CQ.Regalona.r1.7AG0005140, CQ.Regalona.r1.7AG0005150 ... CQ.Regalona.r1.7BG0008660, CQ.Regalona.r1.9AG0015780, CQ.Regalona.r1.9BG0000660
Anacardiaceae	Pistacia vera	5	pistato.v30055570, pistato.v30113250, pistato.v30187920 ... pistato.v30232340, pistato.v30287400
Apiaceae	Apium graveolens	4	Ag1G02040, Ag5G01775, Ag6G02230, Ag9G00142
Arecaceae	Cocos nucifera	4	COCNU_03G000010, COCNU_04G009820, COCNU_04G010440 ... COCNU_06G017700
Arecaceae	Phoenix dactylifera	3	gene-LOC103701143, gene-LOC103707297, gene-LOC103709188
Asparagaceae	Asparagus officinalis	3	AsparagusV1_05.1640.V1.1, AsparagusV1_07.1083.V1.1 ... AsparagusV1_07.3115.V1.1
Asteraceae	Flaveria trinervia	4	Ftri14G10302, Ftri15G09275, Ftri16G04182, Ftri17G01101
Brassicaceae	Arabidopsis thaliana	3	AT3G17360.1, AT3G19050.1, AT3G44050.1
Brassicaceae	Eutrema salsugineum	3	Thhalv10010073m.g.v1.0, Thhalv10019870m.g.v1.0 ... Thhalv10019874m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp3g15530.v2.2, Sp3g17150.v2.2, Sp5g17250.v2.2
Brassicaceae	Brassica nigra	3	BniB01g045320.2N, BniB01g047410.2N, BniB08g056860.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq05G1531, Ceq07G1976, Ceq09G1410
Casuarinaceae	Casuarina glauca	3	Cgl05G1530, Cgl07G2172, Cgl09G1502
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno01g00190, gene.Cymno01g15360, gene.Cymno04g06760 ... gene.Cymno05g06170
Dunaliellaceae	Dunaliella salina	8	Dusal.0038s00038.v1.0, Dusal.0040s00027.v1.0 ... Dusal.0041s00037.v1.0, Dusal.0224s00019.v1.0, Dusal.0225s00005.v1.0, Dusal.0284s00013.v1.0, Dusal.0342s00004.v1.0, Dusal.0699s00003.v1.0
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate02g39880, gene.Thate04g14110, gene.Thate06g13200
Malvaceae	Hibiscus hamabo Siebold & Zucc.	3	nbisL1-mrna-11921, nbisL1-mrna-444, nbisL1-mrna-5477
Nitrariaceae	Nitraria sibirica	4	evm.TU.LG08.41, evm.TU.LG09.520, evm.TU.LG09.521 ... evm.TU.LG11.1122
Plantaginaceae	Plantago ovata	3	Pov_00015724, Pov_00026333, Pov_00035518
Plumbaginaceae	Limonium bicolor	4	Lb1G04325, Lb3G17181, Lb3G19277, Lb3G19281
Poaceae	Echinochloa crus-galli	11	AH03.3839, AH05.3873, BH01.716, BH03.4124, BH05.3978 ... BH06.2885, CH01.713, CH03.4399, CH03.4838, CH05.4192, Contig309.73
Poaceae	Eleusine coracana subsp. coracana	2	gene-QOZ80_3AG0215980, gene-QOZ80_3BG0261250
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.2HG0120880.1, HORVU.MOREX.r3.5HG0437720.1 ... HORVU.MOREX.r3.5HG0438440.1, HORVU.MOREX.r3.5HG0510860.1
Poaceae	Lolium multiflorum	5	gene-QYE76_000502, gene-QYE76_000517, gene-QYE76_035819 ... gene-QYE76_039349, gene-QYE76_061813
Poaceae	Oryza coarctata	5	Oco05G023700, Oco06G024620, Oco13G013850, Oco14G014660 ... Oco24G009220
Poaceae	Oryza sativa	3	LOC_Os03g53920.1, LOC_Os07g44400.1, LOC_Os12g39980.1
Poaceae	Paspalum vaginatum	3	gene-BS78_01G080100, gene-BS78_02G366100 ... gene-BS78_08G123300
Poaceae	Puccinellia tenuiflora	5	Pt_Chr0107185, Pt_Chr0304831, Pt_Chr0704135, Pt_Chr0704142 ... Pt_Chr0704161
Poaceae	Sporobolus alterniflorus	8	Chr04G018200, Chr04G028640, Chr06G018820, Chr07G027600 ... Chr12G037590, Chr24G013970, Chr24G014160, Chr28G012770
Poaceae	Thinopyrum elongatum	5	Tel2E01G301100, Tel5E01G138600, Tel5E01G138700 ... Tel5E01G141300, Tel5E01G620200
Poaceae	Triticum dicoccoides	8	gene_TRIDC2AG018780, gene_TRIDC2BG022610 ... gene_TRIDC5AG010190, gene_TRIDC5AG010330, gene_TRIDC5AG056840, gene_TRIDC5BG011820, gene_TRIDC5BG012080, gene_TRIDC5BG060980
Poaceae	Triticum aestivum	10	TraesCS2A02G149500.1, TraesCS2B02G174600.1 ... TraesCS2D02G154600.1, TraesCS5A02G067300.1, TraesCS5A02G390000.1, TraesCS5B02G072900.1, TraesCS5B02G074200.1, TraesCS5B02G395000.1, TraesCS5D02G078500.1, TraesCS5D02G399800.1
Poaceae	Zea mays	4	Zm00001eb057370_P001, Zm00001eb135060_P001 ... Zm00001eb210340_P001, Zm00001eb328750_P001
Poaceae	Zoysia japonica	3	nbis-gene-15074, nbis-gene-263, nbis-gene-30461
Poaceae	Zoysia macrostachya	3	Zma_g26049, Zma_g473, Zma_g6938
Portulacaceae	Portulaca oleracea	5	evm.TU.LG02.1872, evm.TU.LG02.428, evm.TU.LG05.2228 ... evm.TU.LG07.1345, evm.TU.LG08.1886
Posidoniaceae	Posidonia oceanica	3	gene.Posoc01g12950, gene.Posoc03g00470, gene.Posoc03g28550
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_12_RagTag.486, evm.TU.Scaffold_1_RagTag.2133 ... evm.TU.Scaffold_2_RagTag.275, evm.TU.Scaffold_3_RagTag.701
Rhizophoraceae	Carallia pectinifolia	4	nbisL1-mrna-1267, nbisL1-mrna-24257, nbisL1-mrna-4922 ... nbisL1-mrna-5936
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-12899, nbisL1-mrna-16941, nbisL1-mrna-18477
Rhizophoraceae	Ceriops zippeliana	6	nbisL1-mrna-19741, nbisL1-mrna-3404, nbisL1-mrna-6384 ... nbisL1-mrna-6385, nbisL1-mrna-6386, nbisL1-mrna-6387
Rhizophoraceae	Kandelia candel	3	evm.TU.utg000016l.189, evm.TU.utg000019l.791 ... evm.TU.utg000027l.268
Rhizophoraceae	Kandelia obovata	3	Maker00012574, Maker00016779, Maker00017901
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-18826, nbisL1-mrna-4749, nbisL1-mrna-5714
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-11966, nbisL1-mrna-13135, nbisL1-mrna-14064 ... nbisL1-mrna-6109
Salicaceae	Populus euphratica	5	populus_peu08519, populus_peu08958, populus_peu08959 ... populus_peu20736, populus_peu36831
Solanaceae	Lycium barbarum	3	gene-LOC132599085, gene-LOC132600674, gene-LOC132626609
Solanaceae	Solanum chilense	4	SOLCI002697400, SOLCI003294100, SOLCI004338900 ... SOLCI004339000
Solanaceae	Solanum pennellii	3	gene-LOC107005003, gene-LOC107006540, gene-LOC107007729
Tamaricaceae	Reaumuria soongarica	3	MSTRG.11965_chr07_+, STRG.11368_chr02_-, gene_3022
Tamaricaceae	Tamarix chinensis	4	TC08G0528, TC08G0529, TC10G0544, TC11G1278
Zosteraceae	Zostera marina	3	Zosma03g17300.v3.1, Zosma03g18100.v3.1, Zosma05g33120.v3.1