halophFGD

Basic Information

Locus ID: Ag8G01911

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Short Name: BRL2

Description: Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr8	249612646	249616137	-	Ag8G01911

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.49	105,281.55 Da	37.62	104.26	0.00

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF08263	Leucine rich repeat N-terminal domain	32	70	1.6E-11	IPR013210
Pfam	PF13516	Leucine Rich repeat	604	618	1.1	IPR001611
Pfam	PF13855	Leucine rich repeat	201	257	1.6E-10	IPR001611
Pfam	PF13855	Leucine rich repeat	271	330	1.0E-6	IPR001611
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	833	949	1.1E-6	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	816	952	2.23E-18	IPR011009
SUPERFAMILY	SSF52058	L domain-like	56	360	3.06E-47	-
SUPERFAMILY	SSF52058	L domain-like	569	718	1.25E-29	-
SUPERFAMILY	SSF52058	L domain-like	269	530	3.97E-53	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	33	142	1.2E-18	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	166	720	7.0E-211	IPR032675
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	799	953	4.0E-29	-
Gene3D	G3DSA:3.30.1490.310	-	545	601	7.0E-211	-
SMART	SM00369	LRR_typ_2	220	243	240.0	IPR003591
SMART	SM00369	LRR_typ_2	675	698	290.0	IPR003591
SMART	SM00369	LRR_typ_2	627	651	22.0	IPR003591
SMART	SM00369	LRR_typ_2	512	535	120.0	IPR003591
SMART	SM00369	LRR_typ_2	269	293	290.0	IPR003591
SMART	SM00369	LRR_typ_2	439	463	290.0	IPR003591
SMART	SM00369	LRR_typ_2	487	511	59.0	IPR003591
SMART	SM00369	LRR_typ_2	244	267	13.0	IPR003591

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K13415 (protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1])

Pathway:

ko04075 (Plant hormone signal transduction) map04075 (Plant hormone signal transduction)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G01950.1	BRI1-like 2. Encodes a leucine rich repeat receptor kinase and associated with provascular/procambial cells. Similar to BRI, brassinosteroid receptor protein.
RefSeq	XP_017215343.1	PREDICTED: serine/threonine-protein kinase BRI1-like 2 [Daucus carota subsp. sativus]
Swiss-Prot	Q9ZPS9	Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana OX=3702 GN=BRL2 PE=1 SV=1
TrEMBL	A0A161ZK91	non-specific serine/threonine protein kinase OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_023534 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	0.673072	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	0.316353	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	0.269134	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	0.186072	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	0.08995	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	0	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	0.118884	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	0	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	10.873042	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	9.436553	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	13.132778	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	9.067115	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	8.285749	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	6.918634	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	0.048918	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	0.455243	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	1.42016	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	4.121187	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	1.057007	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	2.315249	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	3.721522	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	12.783132	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	15.270445	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	13.671845	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	11.536273	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	8.252582	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	6.624304	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	4.975779	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	8.695136	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	0		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	0.079133		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	0.257031		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	0.035694		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	2.06371		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	0		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	0.024428		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	0		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	0		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	3.007694	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	0.890765	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	0.103189	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	0	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	0.04459	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	0.661839	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	1.144744	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	0	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	2.534875	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	6.167778	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	9.647566	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	8.163665	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	5	jg16969, jg20134, jg20597, jg39452, jg5096
Aizoaceae	Mesembryanthemum crystallinum	2	gene_13304, gene_17787
Amaranthaceae	Atriplex hortensis	3	Ah026997, Ah027172, Ah035268
Amaranthaceae	Beta vulgaris	2	BVRB_2g024180, BVRB_6g131900
Amaranthaceae	Salicornia bigelovii	6	Sbi_jg13558, Sbi_jg21385, Sbi_jg22467, Sbi_jg30918 ... Sbi_jg52335, Sbi_jg58360
Amaranthaceae	Salicornia europaea	3	Seu_jg16345, Seu_jg25960, Seu_jg9522
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00016421, GOSA_00017518, GOSA_00023162
Amaranthaceae	Suaeda glauca	6	Sgl33353, Sgl33704, Sgl38707, Sgl39015, Sgl62901, Sgl67514
Amaranthaceae	Chenopodium album	8	gene:ENSEOMG00000000128, gene:ENSEOMG00000001631 ... gene:ENSEOMG00000003080, gene:ENSEOMG00000003519, gene:ENSEOMG00000020379, gene:ENSEOMG00000025380, gene:ENSEOMG00000028073, gene:ENSEOMG00000049354
Amaranthaceae	Chenopodium quinoa	6	CQ.Regalona.r1.1BG0019470, CQ.Regalona.r1.2AG0021170 ... CQ.Regalona.r1.6AG0021280, CQ.Regalona.r1.6AG0022780, CQ.Regalona.r1.6BG0022460, CQ.Regalona.r1.6BG0024100
Anacardiaceae	Pistacia vera	3	pistato.v30043920, pistato.v30150980, pistato.v30219230
Apiaceae	Apium graveolens	5	Ag3G01242, Ag3G02408, Ag4G02200, Ag7G02272, Ag8G01911
Arecaceae	Cocos nucifera	6	COCNU_01G006760, COCNU_02G000700, COCNU_05G009110 ... COCNU_06G001450, COCNU_11G010960, COCNU_14G000730
Arecaceae	Phoenix dactylifera	6	gene-LOC103696970, gene-LOC103702338, gene-LOC103704826 ... gene-LOC103710640, gene-LOC103713759, gene-LOC103720660
Asparagaceae	Asparagus officinalis	4	AsparagusV1_01.2219.V1.1, AsparagusV1_03.1255.V1.1 ... AsparagusV1_05.1187.V1.1, AsparagusV1_08.577.V1.1
Asteraceae	Flaveria trinervia	4	Ftri12G24194, Ftri12G31250, Ftri15G22334, Ftri17G02835
Brassicaceae	Arabidopsis thaliana	4	AT1G55610.1, AT2G01950.1, AT3G13380.1, AT4G39400.1
Brassicaceae	Eutrema salsugineum	4	Thhalv10003548m.g.v1.0, Thhalv10011192m.g.v1.0 ... Thhalv10019932m.g.v1.0, Thhalv10024249m.g.v1.0
Brassicaceae	Schrenkiella parvula	4	Sp1g41230.v2.2, Sp2g13390.v2.2, Sp3g11570.v2.2 ... Sp7g36460.v2.2
Brassicaceae	Brassica nigra	5	BniB01g051820.2N, BniB02g065260.2N, BniB03g015200.2N ... BniB05g000520.2N, BniB07g000790.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq01G1580, Ceq06G1844
Casuarinaceae	Casuarina glauca	3	Cgl01G1743, Cgl06G1908, Cgl09G0901
Cymodoceaceae	Cymodocea nodosa	3	gene.Cymno06g09320, gene.Cymno12g00570, gene.Cymno16g00720
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate03g19520, gene.Thate05g25160, gene.Thate09g18080
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-7279
Nitrariaceae	Nitraria sibirica	3	evm.TU.LG02.779, evm.TU.LG03.1129, evm.TU.LG05.2132
Plantaginaceae	Plantago ovata	3	Pov_00004331, Pov_00020870, Pov_00025891
Plumbaginaceae	Limonium bicolor	2	Lb1G06042, Lb4G25660
Poaceae	Echinochloa crus-galli	1	CH08.1273
Poaceae	Eleusine coracana subsp. coracana	9	gene-QOZ80_1AG0031240, gene-QOZ80_1BG0081200 ... gene-QOZ80_2AG0119340, gene-QOZ80_2BG0174110, gene-QOZ80_6AG0520910, gene-QOZ80_6BG0473390, gene-QOZ80_8AG0627020, gene-QOZ80_8AG0627030, gene-QOZ80_8BG0655710
Poaceae	Hordeum vulgare	3	HORVU.MOREX.r3.3HG0235070.1.CDS1 ... HORVU.MOREX.r3.3HG0285210.1.CDS1, HORVU.MOREX.r3.5HG0471560.1.CDS1
Poaceae	Lolium multiflorum	2	gene-QYE76_004382, gene-QYE76_054950
Poaceae	Oryza coarctata	6	Oco01G020520, Oco02G019250, Oco16G006440, Oco17G001930 ... Oco18G001830, Oco19G000240
Poaceae	Oryza sativa	4	LOC_Os01g52050.1, LOC_Os08g25380.1, LOC_Os09g12240.1 ... LOC_Os10g02500.1
Poaceae	Paspalum vaginatum	4	gene-BS78_01G267200, gene-BS78_02G140500 ... gene-BS78_03G257300, gene-BS78_09G256400
Poaceae	Puccinellia tenuiflora	4	Pt_Chr0500404, Pt_Chr0602728, Pt_Chr0602860, Pt_Chr0702726
Poaceae	Sporobolus alterniflorus	11	Chr02G011190, Chr02G012090, Chr03G015010, Chr05G022490 ... Chr06G021770, Chr08G015100, Chr0G030680, Chr11G015700, Chr15G017360, Chr21G006730, Chr29G007540
Poaceae	Thinopyrum elongatum	3	Tel3E01G173400, Tel3E01G416500, Tel5E01G300700
Poaceae	Triticum dicoccoides	6	gene_TRIDC3AG012010, gene_TRIDC3AG036670 ... gene_TRIDC3BG016160, gene_TRIDC3BG041310, gene_TRIDC5AG028880, gene_TRIDC5BG030350
Poaceae	Triticum aestivum	9	TraesCS3A02G099400.1.cds1, TraesCS3A02G245000.1.cds1 ... TraesCS3B02G115800.1.cds1, TraesCS3B02G275000.1.cds1, TraesCS3D02G099700.1.cds1, TraesCS3D02G246500.1.cds1, TraesCS5A02G177300.1.cds1, TraesCS5B02G174400.1.cds1, TraesCS5D02G181500.1.cds1
Poaceae	Zea mays	5	Zm00001eb026010_P001, Zm00001eb154730_P001 ... Zm00001eb177520_P001, Zm00001eb309030_P001, Zm00001eb361520_P001
Poaceae	Zoysia japonica	5	nbis-gene-12750, nbis-gene-26311, nbis-gene-28793 ... nbis-gene-43830, nbis-gene-53180
Poaceae	Zoysia macrostachya	5	Zma_g11019, Zma_g15818, Zma_g29683, Zma_g31885, Zma_g8534
Portulacaceae	Portulaca oleracea	4	evm.TU.LG03.2364, evm.TU.LG07.323, evm.TU.LG15.634 ... evm.TU.LG17.1410
Posidoniaceae	Posidonia oceanica	4	gene.Posoc02g22660, gene.Posoc03g09820, gene.Posoc07g05710 ... gene.Posoc09g11180
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_17_RagTag.717, evm.TU.Scaffold_3_RagTag.1028 ... evm.TU.Scaffold_6_RagTag.1611, evm.TU.Scaffold_7_RagTag.3
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-17573, nbisL1-mrna-19750, nbisL1-mrna-23409
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-10201, nbisL1-mrna-12590, nbisL1-mrna-17770 ... nbisL1-mrna-19847
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-12169, nbisL1-mrna-20030, nbisL1-mrna-22391 ... nbisL1-mrna-2296
Rhizophoraceae	Kandelia candel	4	add.evm.TU.utg000011l.382, add.evm.TU.utg000013l.133 ... add.evm.TU.utg000019l.277, add.evm.TU.utg000028l.1
Rhizophoraceae	Kandelia obovata	2	Maker00004508, Maker00007000
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-19939, nbisL1-mrna-21027, nbisL1-mrna-22836 ... nbisL1-mrna-22860
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-14331, nbisL1-mrna-1719, nbisL1-mrna-22537 ... nbisL1-mrna-4469
Salicaceae	Populus euphratica	6	populus_peu00004, populus_peu07264, populus_peu13880 ... populus_peu17081, populus_peu21261, populus_peu23048
Solanaceae	Lycium barbarum	3	gene-LOC132614975, gene-LOC132615004, gene-LOC132616627
Solanaceae	Solanum chilense	4	SOLCI002088200, SOLCI002216100, SOLCI002599500 ... SOLCI004292600
Solanaceae	Solanum pennellii	4	gene-LOC107015854, gene-LOC107017735, gene-LOC107024267 ... gene-LOC107027997
Tamaricaceae	Reaumuria soongarica	3	STRG.19650_chr07_-, STRG.5156_chr03_-, gene_2243
Tamaricaceae	Tamarix chinensis	3	TC03G0328, TC04G0446, TC11G0356
Zosteraceae	Zostera marina	5	Zosma01g05850.v3.1, Zosma03g14440.v3.1, Zosma03g14450.v3.1 ... Zosma05g14380.v3.1, Zosma05g25890.v3.1