halophFGD

Basic Information

Locus ID: Ag8G01819

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: Protein kinase domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr8	244692002	244695655	-	Ag8G01819

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.47	55,483.44 Da	31.98	87.09	-0.40

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd14066	STKc_IRAK	184	450	4.42643E-102	-
Pfam	PF00069	Protein kinase domain	180	447	1.4E-48	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	161	456	4.86E-83	IPR011009
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	149	253	5.1E-34	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	254	459	1.1E-64	-
SMART	SM00220	serkin_6	178	449	1.2E-37	IPR000719
ProSiteProfiles	PS50011	Protein kinase domain profile.	178	457	38.590778	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	300	312	-	IPR008271
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	184	207	-	IPR017441
MobiDBLite	mobidb-lite	consensus disorder prediction	456	498	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	480	498	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	456	472	-	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G56720.1	Protein kinase superfamily protein.
RefSeq	XP_017222724.1	PREDICTED: probable receptor-like protein kinase At5g18500 [Daucus carota subsp. sativus]
Swiss-Prot	Q8LEB6	Probable receptor-like protein kinase At5g18500 OS=Arabidopsis thaliana OX=3702 GN=At5g18500 PE=2 SV=1
TrEMBL	A0A164SL04	Protein kinase domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_023399 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	1.001918	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	1.100345	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	3.414608	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	3.495618	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	1.80919	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	1.76348	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	1.750009	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	1.558686	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	8.403987	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	8.480556	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	9.377879	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	8.864961	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	8.503081	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	7.209499	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	23.650496	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	16.514868	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	22.980623	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	53.873718	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	19.623688	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	59.477818	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	78.930672	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	34.356869	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	32.756844	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	25.865475	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	23.268272	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	29.049849	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	33.291683	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	20.814478	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	33.202721	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	0.905795		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	1.266074		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	1.106494		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	13.720312		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	8.58421		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	16.187618		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	7.443484		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	1.679355		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	2.545456		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	6.299297	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	5.261215	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	4.701718	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	90.341003	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	52.473972	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	42.014141	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	117.81665	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	92.879021	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	384.784851	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	11.982378	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	15.701653	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	12.099391	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Apiaceae	Apium graveolens	6	Ag1G02048, Ag1G02049, Ag5G00954, Ag5G01786, Ag8G01819 ... Ag9G01952
Asparagaceae	Asparagus officinalis	1	AsparagusV1_07.1113.V1.1
Brassicaceae	Brassica nigra	1	BniB06g054260.2N
Nitrariaceae	Nitraria sibirica	1	evm.TU.LG04.811
Rhizophoraceae	Ceriops zippeliana	1	nbisL1-mrna-18637
Salicaceae	Populus euphratica	2	populus_peu13163, populus_peu22331