Basic Information
Locus ID:
Ag8G01535
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 211286100 | 211299693 | - | Ag8G01535 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.31 | 7,687.60 Da | 61.88 | 76.46 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| PRJNA723697 | SRX10692252 | 0 | Shengqin NO.2 | seed | S1-1 | S1-1 | initial formation stage (S1) |
| PRJNA723697 | SRX10692254 | 0 | Shengqin NO.2 | seed | S1-3 | S1-3 | initial formation stage (S1) |
| PRJNA723697 | SRX10692255 | 0 | Shengqin NO.2 | seed | S3-1 | S3-1 | middle development stage (S3) |
| PRJNA723697 | SRX10692256 | 0 | Shengqin NO.2 | seed | S3-2 | S3-2 | middle development stage (S3) |
| PRJNA723697 | SRX10692257 | 0.646823 | Shengqin NO.2 | seed | S3-3 | S3-3 | middle development stage (S3) |
| PRJNA723697 | SRX10692258 | 0 | Shengqin NO.2 | seed | S5-1 | S5-1 | maturation stage (S5) |
| PRJNA723697 | SRX10692259 | 0 | Shengqin NO.2 | seed | S5-2 | S5-2 | maturation stage (S5) |
| PRJNA723697 | SRX10692260 | 0 | Shengqin NO.2 | seed | S5-3 | S5-3 | maturation stage (S5) |
| PRJNA884666 | SRX17729272 | 0.85784 | celery | anther | W99A-r1 | male sterile line | |
| PRJNA884666 | SRX17729273 | 0 | celery | anther | W99A-r2 | male sterile line | |
| PRJNA884666 | SRX17729274 | 0.601604 | celery | anther | W99A-r3 | male sterile line | |
| PRJNA884666 | SRX17729275 | 0 | celery | anther | W99B-r1 | maintainer line | |
| PRJNA884666 | SRX17729276 | 0 | celery | anther | W99B-r2 | maintainer line | |
| PRJNA884666 | SRX17729277 | 0.147024 | celery | anther | W99B-r3 | maintainer line | |
| PRJNA884180 | SRX17743889 | 1.306554 | var. secalinum Yablochny | collenchyma | Col_S1_rep1-1 | ||
| PRJNA884180 | SRX17748056 | 0.237726 | var. secalinum Yablochny | collenchyma | Col_S1_rep3 | biological replicate 3 | |
| PRJNA884180 | SRX17748057 | 0.288695 | var. secalinum Yablochny | collenchyma | Col_S1_rep4 | biological replicate 4 | |
| PRJNA884180 | SRX17748678 | 0 | var. secalinum Yablochny | parenchyma | Par_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17748679 | 0 | var. secalinum Yablochny | parenchyma | Par_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17748680 | 0 | var. secalinum Yablochny | parenchyma | Par_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17748681 | 0 | var. secalinum Yablochny | parenchyma | Par_S1_rep4 | Biological replicate 4 | |
| PRJNA884180 | SRX17748898 | 0 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17748899 | 0.125245 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17748900 | 0 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17748901 | 0 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep4 | Biological replicate 4 | |
| PRJNA884180 | SRX17749129 | 0 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17749130 | 0 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17749131 | 0.120948 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17749132 | 0 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep4 | Biological replicate 4 | |
| PRJNA1124269 | SRX24936411 | 0 | leaf | CK1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936412 | 0 | leaf | CK2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936413 | 0.091666 | leaf | CK3 | replicate=biological replicate3 | ||
| PRJNA1124269 | SRX24936414 | 0 | leaf | D1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936415 | 0 | leaf | D2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936416 | 0 | leaf | D3 | replicate=biological replicate3 | ||
| PRJNA1124269 | SRX24936417 | 0 | leaf | MD1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936418 | 0 | leaf | MD2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936419 | 0.186747 | leaf | MD3 | replicate=biological replicate3 | ||
| PRJNA387092 | SRX2833309 | 0 | shanghaihuangxin | leaf | leaves between 0.5 and 1 cm in breadth, folded; | stage 2 | |
| PRJNA387092 | SRX2833321 | 0 | shanghaihuangxin | leaf | leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion | stage 5 | |
| PRJNA387092 | SRX2833323 | 0 | shanghaihuangxin | leaf | leaves >3 cm, unfolded, with clearstem extension | stage 7 | |
| PRJNA543957 | SRX5879598 | 0 | Zhangzhou lvqing | stem | Se3 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879599 | 0 | Zhangzhou lvqing | stem | Se2 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879600 | 0.23814 | Zhangzhou lvqing | stem | Mock2 | mock | |
| PRJNA543957 | SRX5879601 | 0 | Zhangzhou lvqing | stem | Mock1 | mock | |
| PRJNA543957 | SRX5879602 | 0 | Zhangzhou lvqing | stem | Se1 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879603 | 0.152964 | Zhangzhou lvqing | stem | Mock3 | mock | |
| PRJNA609149 | SRX7815917 | 0 | Jinnan Shiqin | flower bud | early flower bud | early flower bud | |
| PRJNA609149 | SRX7815918 | 0.321421 | Jinnan Shiqin | flower bud | middle flower bud | middle flower bud | |
| PRJNA609149 | SRX7815919 | 0 | Jinnan Shiqin | flower bud | early flowering period | early flowering period |
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg1541 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_17169 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah032391 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g041480 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg29962, Sbi_jg43425 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg18477 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00004235 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl66254, Sgl70570 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000014745, gene:ENSEOMG00000020728 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.2AG0004420, CQ.Regalona.r1.2BG0005620 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30165940 |
| Apiaceae | Apium graveolens | 3 | Ag11G04173, Ag7G01712, Ag8G01535 |
| Arecaceae | Cocos nucifera | 1 | COCNU_16G002180 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103701638 |
| Asteraceae | Flaveria trinervia | 1 | Ftri11G08566 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G54460.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10010067m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp5g07960.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB06g065390.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq05G0876 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl05G0889 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno05g09600 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0022s00035.v1.0, Dusal.0193s00008.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate06g17190 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG02.1984 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00014812 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G02355 |
| Poaceae | Echinochloa crus-galli | 3 | AH02.4531, BH02.4584, CH02.4635 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_1AG0046780 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0320710.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_058087 |
| Poaceae | Oryza coarctata | 2 | Oco01G030060, Oco02G031210 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_03G403500 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0403035 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr02G000930, Chr05G033740 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G794500 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC3AG069780, gene_TRIDC3BG078800 |
| Poaceae | Triticum aestivum | 2 | TraesCS3B02G543900.1, TraesCS3D02G490000.1 |
| Poaceae | Zea mays | 2 | Zm00001eb140810_P001, Zm00001eb140820_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-10822 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g9386 |
| Portulacaceae | Portulaca oleracea | 3 | evm.TU.LG10.383, evm.TU.LG17.379, evm.TU.LG25.65 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g21150 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_11_RagTag.57 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-7154 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-13637 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-14504, nbisL1-mrna-14505 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000005l.345 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00010191 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-243 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-22075 |
| Salicaceae | Populus euphratica | 1 | populus_peu35074 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132615369 |
| Solanaceae | Solanum chilense | 1 | SOLCI001589500 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107004568 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_14390 |
| Tamaricaceae | Tamarix chinensis | 1 | TC01G3892 |
| Zosteraceae | Zostera marina | 1 | Zosma02g16880.v3.1 |