halophFGD

Basic Information

Locus ID: Ag8G01452

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: Oxidation resistance protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr8	199287663	199293371	+	Ag8G01452

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.55	37,550.68 Da	49.66	70.72	-0.51

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07534	TLD	190	327	2.1E-28	IPR006571
SMART	SM00584	109ultra	164	328	7.3E-26	IPR006571
ProSiteProfiles	PS51886	TLDc domain profile.	165	328	25.857727	IPR006571
MobiDBLite	mobidb-lite	consensus disorder prediction	14	35	-	-

Best hit

Source	Best Hit ID	Description
TAIR	AT2G05590.2	TLD-domain containing nucleolar protein.
RefSeq	XP_017223232.1	PREDICTED: nuclear receptor coactivator 7 [Daucus carota subsp. sativus]
Swiss-Prot	Q8N573	Oxidation resistance protein 1 OS=Homo sapiens OX=9606 GN=OXR1 PE=1 SV=2
TrEMBL	A0A175Y916	TLDc domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_000354 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	3.552776	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	3.800759	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	2.916777	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	3.872358	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	3.357444	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	1.966098	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	2.411465	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	3.72994	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	7.969993	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	8.539779	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	7.872849	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	10.395054	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	8.340989	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	7.967953	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	7.906604	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	6.856013	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	8.736462	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	6.527554	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	7.387882	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	5.236743	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	6.268794	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	7.631309	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	8.833191	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	10.786993	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	8.162778	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	6.815476	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	9.131136	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	6.437313	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	7.995178	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	1.520742		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	2.06306		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	1.555002		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	6.864446		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	11.554975		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	4.625668		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	0.705863		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	0.694035		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	0.52533		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	6.942639	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	3.287931	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	2.921741	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	2.795748	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	3.553436	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	4.590204	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	6.618611	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	2.084917	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	5.979075	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	16.233747	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	42.884865	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	31.310848	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	3	jg1011, jg28747, jg39507
Aizoaceae	Mesembryanthemum crystallinum	2	gene_15932, gene_23714
Amaranthaceae	Atriplex hortensis	2	Ah019167, Ah027327
Amaranthaceae	Beta vulgaris	2	BVRB_3g048270, BVRB_6g135150
Amaranthaceae	Salicornia bigelovii	5	Sbi_jg12708, Sbi_jg37944, Sbi_jg52050, Sbi_jg53198 ... Sbi_jg6083
Amaranthaceae	Salicornia europaea	2	Seu_jg28231, Seu_jg8697
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00006164, GOSA_00010316
Amaranthaceae	Suaeda glauca	12	Sgl00904, Sgl05445, Sgl05858, Sgl05982, Sgl21888, Sgl27168 ... Sgl33555, Sgl39208, Sgl43260, Sgl48088, Sgl77998, Sgl80503
Amaranthaceae	Chenopodium album	8	gene:ENSEOMG00000000880, gene:ENSEOMG00000001473 ... gene:ENSEOMG00000003278, gene:ENSEOMG00000015440, gene:ENSEOMG00000018929, gene:ENSEOMG00000024407, gene:ENSEOMG00000032529, gene:ENSEOMG00000044360
Amaranthaceae	Chenopodium quinoa	3	CQ.Regalona.r1.3BG0000980, CQ.Regalona.r1.6AG0024220 ... CQ.Regalona.r1.6BG0025560
Anacardiaceae	Pistacia vera	2	pistato.v30196530, pistato.v30239770
Apiaceae	Apium graveolens	5	Ag4G01482, Ag4G02487, Ag5G02181, Ag5G02617, Ag8G01452
Arecaceae	Cocos nucifera	3	COCNU_05G005940, COCNU_07G001310, COCNU_10G000970
Arecaceae	Phoenix dactylifera	5	gene-LOC103703894, gene-LOC103711327, gene-LOC103715422 ... gene-LOC120103700, gene-LOC120108983
Asparagaceae	Asparagus officinalis	2	AsparagusV1_04.199.V1.1, AsparagusV1_08.2187.V1.1
Asteraceae	Flaveria trinervia	2	Ftri12G18805, Ftri17G05096
Brassicaceae	Arabidopsis thaliana	2	AT2G05590.2, AT4G39870.1
Brassicaceae	Eutrema salsugineum	1	Thhalv10002628m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp3g24070.v2.2, Sp7g36020.v2.2
Brassicaceae	Brassica nigra	4	BniB01g032880.2N, BniB02g010820.2N, BniB02g089000.2N ... BniB05g000180.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq06G1745, Ceq07G1251
Casuarinaceae	Casuarina glauca	2	Cgl06G1810, Cgl07G1327
Cymodoceaceae	Cymodocea nodosa	3	gene.Cymno09g04760, gene.Cymno10g00690, gene.Cymno11g06780
Dunaliellaceae	Dunaliella salina	1	Dusal.0738s00003.v1.0
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate05g28180, gene.Thate08g00520, gene.Thate08g24240
Malvaceae	Hibiscus hamabo Siebold & Zucc.	3	nbisL1-mrna-10164, nbisL1-mrna-5050, nbisL1-mrna-6728
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG02.662, evm.TU.LG11.740
Plantaginaceae	Plantago ovata	1	Pov_00020966
Plumbaginaceae	Limonium bicolor	5	Lb1G05910, Lb2G11752, Lb5G27297, Lb5G27816, Lb7G32933
Poaceae	Echinochloa crus-galli	9	AH03.955, AH06.849, AH07.3523, BH03.1113, BH06.891, CH06.929 ... BH07.3340, CH03.1258, CH07.3403
Poaceae	Eleusine coracana subsp. coracana	5	gene-QOZ80_2AG0146180, gene-QOZ80_2BG0201690 ... gene-QOZ80_6AG0514290, gene-QOZ80_6BG0465990, gene-QOZ80_7AG0565040
Poaceae	Hordeum vulgare	2	HORVU.MOREX.r3.6HG0613660.2, HORVU.MOREX.r3.7HG0665270.1
Poaceae	Lolium multiflorum	4	gene-QYE76_025452, gene-QYE76_028615, gene-QYE76_028781 ... gene-QYE76_041691
Poaceae	Oryza coarctata	5	Oco03G021950, Oco04G022580, Oco11G005520, Oco13G006150 ... Oco14G006760
Poaceae	Oryza sativa	3	LOC_Os02g51770.1, LOC_Os06g11790.1, LOC_Os07g25700.1
Poaceae	Paspalum vaginatum	3	gene-BS78_02G088800, gene-BS78_04G282800 ... gene-BS78_10G092400
Poaceae	Puccinellia tenuiflora	4	Pt_Chr0203249, Pt_Chr0304032, Pt_Chr0404831, Pt_Chr0405886
Poaceae	Sporobolus alterniflorus	7	Chr09G019730, Chr0G034040, Chr11G019860, Chr13G003890 ... Chr21G003430, Chr24G006060, Chr28G005430
Poaceae	Thinopyrum elongatum	3	Tel2E01G434700, Tel6E01G541400, Tel7E01G337400
Poaceae	Triticum dicoccoides	3	gene_TRIDC6AG045400, gene_TRIDC6BG053030 ... gene_TRIDC7BG012760
Poaceae	Triticum aestivum	6	TraesCS6A02G300200.1, TraesCS6B02G329900.1 ... TraesCS6D02G280100.1, TraesCS7A02G180000.1, TraesCS7B02G085200.1, TraesCS7D02G181500.1
Poaceae	Zea mays	3	Zm00001eb194150_P003, Zm00001eb306200_P001 ... Zm00001eb372700_P001
Poaceae	Zoysia japonica	6	nbis-gene-1141, nbis-gene-21791, nbis-gene-21792 ... nbis-gene-51444, nbis-gene-57388, nbis-gene-8663
Poaceae	Zoysia macrostachya	4	Zma_g14458, Zma_g17173, Zma_g29363, Zma_g6381
Portulacaceae	Portulaca oleracea	5	evm.TU.LG04.2545, evm.TU.LG05.649, evm.TU.LG08.152 ... evm.TU.LG11.1382, evm.TU.LG25.670
Posidoniaceae	Posidonia oceanica	2	gene.Posoc04g15380, gene.Posoc06g01660
Rhizophoraceae	Bruguiera sexangula	1	evm.TU.Scaffold_6_RagTag.1655
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-1625, nbisL1-mrna-17511
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-15161, nbisL1-mrna-16148
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-12109, nbisL1-mrna-2563, nbisL1-mrna-2564
Rhizophoraceae	Kandelia candel	2	evm.TU.utg000011l.1006, evm.TU.utg000019l.451
Rhizophoraceae	Kandelia obovata	2	Maker00002277, Maker00008303
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-15118, nbisL1-mrna-6255
Rhizophoraceae	Rhizophora mangle	2	nbisL1-mrna-2003, nbisL1-mrna-4417
Salicaceae	Populus euphratica	3	populus_peu13775, populus_peu21599, populus_peu22930
Solanaceae	Lycium barbarum	3	gene-LOC132604336, gene-LOC132609872, gene-LOC132614112
Solanaceae	Solanum chilense	3	SOLCI001763600, SOLCI004776200, SOLCI006618200
Solanaceae	Solanum pennellii	3	gene-LOC107005874, gene-LOC107018026, gene-LOC107031324
Tamaricaceae	Reaumuria soongarica	2	gene_12584, gene_3521
Tamaricaceae	Tamarix chinensis	2	TC05G1460, TC11G0811
Zosteraceae	Zostera marina	2	Zosma01g38320.v3.1, Zosma03g33940.v3.1