halophFGD

Basic Information

Locus ID: Ag8G01406

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: LRR receptor-like serine threonine-protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr8	189179653	189182497	+	Ag8G01406

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.22	81,355.42 Da	37.08	98.25	-0.19

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	429	706	1.1E-17	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	408	708	1.73E-36	IPR011009
SUPERFAMILY	SSF52058	L domain-like	39	305	7.48E-34	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	193	325	1.0E-20	IPR032675
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	511	722	2.2E-27	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	23	192	4.0E-23	IPR032675
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	389	495	5.7E-16	-
ProSiteProfiles	PS51450	Leucine-rich repeat profile.	174	196	7.034293	IPR001611
ProSiteProfiles	PS50011	Protein kinase domain profile.	427	709	21.27663	IPR000719

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005515 (protein binding) GO:0005524 (ATP binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G14390.1	Leucine-rich repeat protein kinase family protein.
RefSeq	XP_017220543.1	PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390 [Daucus carota subsp. sativus]
Swiss-Prot	Q9M9S4	Probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Arabidopsis thaliana OX=3702 GN=At1g14390 PE=1 SV=1
TrEMBL	A0A175YNZ0	Protein kinase domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_027395 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	6.33577	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	0.954605	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	1.434412	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	2.067371	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	2.065048	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	0.123728	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	0.243887	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	0.129161	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	7.111998	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	7.37489	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	7.990456	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	6.76878	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	5.937525	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	5.358408	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	0.784344	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	0.49683	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	1.943566	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	1.952161	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	1.919458	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	0.991396	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	1.480749	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	3.575188	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	5.489861	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	5.658647	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	4.340819	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	5.70531	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	4.268275	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	3.356839	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	3.50526	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	0.127371		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	0.678778		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	0.658796		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	0.30579		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	5.719638		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	0		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	0.575342		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	0.892428		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	0.437894		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	6.440314	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	2.806929	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	0.757866	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	1.048825	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	0.266132	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	3.4666	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	0.911624	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	0.308598	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	1.783863	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	6.049366	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	7.401014	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	4.676763	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	2	jg34740, jg9365
Aizoaceae	Mesembryanthemum crystallinum	1	gene_3742
Amaranthaceae	Atriplex hortensis	1	Ah014065
Amaranthaceae	Beta vulgaris	1	BVRB_6g154470
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg43140, Sbi_jg45739
Amaranthaceae	Salicornia europaea	1	Seu_jg11588
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00026534
Amaranthaceae	Suaeda glauca	2	Sgl36001, Sgl41331
Amaranthaceae	Chenopodium album	3	gene:ENSEOMG00000001686, gene:ENSEOMG00000012095 ... gene:ENSEOMG00000025010
Amaranthaceae	Chenopodium quinoa	2	CQ.Regalona.r1.6AG0001640, CQ.Regalona.r1.6BG0001750
Anacardiaceae	Pistacia vera	1	pistato.v30126480
Apiaceae	Apium graveolens	3	Ag8G01404, Ag8G01406, AgUnG00600
Arecaceae	Cocos nucifera	1	COCNU_03G015840
Arecaceae	Phoenix dactylifera	1	gene-LOC103709770
Asparagaceae	Asparagus officinalis	3	AsparagusV1_01.2308.V1.1, AsparagusV1_01.2309.V1.1 ... AsparagusV1_06.812.V1.1
Asteraceae	Flaveria trinervia	1	Ftri5G07693
Brassicaceae	Arabidopsis thaliana	2	AT1G14390.1, AT2G02780.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10003702m.g.v1.0, Thhalv10006929m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp1g12760.v2.2, Sp2g13880.v2.2
Brassicaceae	Brassica nigra	2	BniB02g065570.2N, BniB06g039520.2N
Casuarinaceae	Casuarina equisetifolia	1	Ceq07G0060
Casuarinaceae	Casuarina glauca	2	Cgl07G0050, Cgl07G0051
Cymodoceaceae	Cymodocea nodosa	1	gene.Cymno16g00810
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate03g24210, gene.Thate09g13900
Nitrariaceae	Nitraria sibirica	1	evm.TU.LG03.206
Plantaginaceae	Plantago ovata	1	Pov_00027217
Plumbaginaceae	Limonium bicolor	3	Lb1G02049, Lb2G13280, Lb7G34590
Poaceae	Echinochloa crus-galli	3	AH06.2141, BH06.1953, CH06.2176
Poaceae	Eleusine coracana subsp. coracana	2	gene-QOZ80_6AG0543760, gene-QOZ80_6BG0497140
Poaceae	Hordeum vulgare	1	HORVU.MOREX.r3.7HG0715280.1
Poaceae	Lolium multiflorum	2	gene-QYE76_034651, gene-QYE76_034799
Poaceae	Oryza coarctata	2	Oco11G011850, Oco12G012020
Poaceae	Oryza sativa	1	LOC_Os06g38970.1
Poaceae	Paspalum vaginatum	1	gene-BS78_10G176800
Poaceae	Puccinellia tenuiflora	2	Pt_Chr0302876, Pt_Chr0400574
Poaceae	Sporobolus alterniflorus	4	Chr02G029440, Chr05G007140, Chr10G017180, Chr11G005310
Poaceae	Thinopyrum elongatum	2	Tel7E01G609100, Tel7E01G610000
Poaceae	Triticum dicoccoides	2	gene_TRIDC7AG051400, gene_TRIDC7BG042510
Poaceae	Triticum aestivum	3	TraesCS7A02G368000.1, TraesCS7B02G260600.1 ... TraesCS7D02G354900.1
Poaceae	Zea mays	1	Zm00001eb386180_P003
Poaceae	Zoysia japonica	5	nbis-gene-10143, nbis-gene-41125, nbis-gene-55226 ... nbis-gene-57205, nbis-gene-57768
Poaceae	Zoysia macrostachya	2	Zma_g30751, Zma_g32994
Portulacaceae	Portulaca oleracea	4	evm.TU.LG03.279, evm.TU.LG12.1427, evm.TU.LG13.334 ... evm.TU.LG21.40
Posidoniaceae	Posidonia oceanica	1	gene.Posoc09g10890
Rhizophoraceae	Bruguiera sexangula	1	evm.TU.Scaffold_17_RagTag.344
Rhizophoraceae	Carallia pectinifolia	1	nbisL1-mrna-22985
Rhizophoraceae	Ceriops tagal	1	nbisL1-mrna-309
Rhizophoraceae	Ceriops zippeliana	1	nbisL1-mrna-14869
Rhizophoraceae	Kandelia candel	1	evm.TU.utg000013l.238
Rhizophoraceae	Kandelia obovata	1	Maker00006586
Rhizophoraceae	Rhizophora apiculata	1	nbisL1-mrna-7148
Rhizophoraceae	Rhizophora mangle	1	nbisL1-mrna-15761
Salicaceae	Populus euphratica	1	populus_peu03115
Solanaceae	Lycium barbarum	1	gene-LOC132641524
Solanaceae	Solanum chilense	1	SOLCI002991400
Solanaceae	Solanum pennellii	1	gene-LOC107020638
Tamaricaceae	Reaumuria soongarica	1	STRG.29263_chr10_-
Tamaricaceae	Tamarix chinensis	1	TC03G0653
Zosteraceae	Zostera marina	2	Zosma01g05790.v3.1, Zosma01g37730.v3.1