Basic Information
Locus ID:
Ag8G01231
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
Calcineurin-like phosphoesterase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 153002602 | 153015649 | + | Ag8G01231 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.21 | 115,663.01 Da | 41.26 | 85.54 | -0.01 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11800.1 | Calcineurin-like metallo-phosphoesterase superfamily protein. | 0 |
| RefSeq | XP_017222577.1 | PREDICTED: uncharacterized protein LOC108199319 [Daucus carota subsp. sativus] | 0 |
| TrEMBL | A0A175YN86 | Metallophos domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_028414 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| PRJNA723697 | SRX10692252 | 21.615421 | Shengqin NO.2 | seed | S1-1 | S1-1 | initial formation stage (S1) |
| PRJNA723697 | SRX10692254 | 18.543465 | Shengqin NO.2 | seed | S1-3 | S1-3 | initial formation stage (S1) |
| PRJNA723697 | SRX10692255 | 17.577488 | Shengqin NO.2 | seed | S3-1 | S3-1 | middle development stage (S3) |
| PRJNA723697 | SRX10692256 | 18.861601 | Shengqin NO.2 | seed | S3-2 | S3-2 | middle development stage (S3) |
| PRJNA723697 | SRX10692257 | 18.951017 | Shengqin NO.2 | seed | S3-3 | S3-3 | middle development stage (S3) |
| PRJNA723697 | SRX10692258 | 17.286751 | Shengqin NO.2 | seed | S5-1 | S5-1 | maturation stage (S5) |
| PRJNA723697 | SRX10692259 | 19.506449 | Shengqin NO.2 | seed | S5-2 | S5-2 | maturation stage (S5) |
| PRJNA723697 | SRX10692260 | 15.624656 | Shengqin NO.2 | seed | S5-3 | S5-3 | maturation stage (S5) |
| PRJNA884666 | SRX17729272 | 28.507198 | celery | anther | W99A-r1 | male sterile line | |
| PRJNA884666 | SRX17729273 | 28.625414 | celery | anther | W99A-r2 | male sterile line | |
| PRJNA884666 | SRX17729274 | 33.339153 | celery | anther | W99A-r3 | male sterile line | |
| PRJNA884666 | SRX17729275 | 31.000399 | celery | anther | W99B-r1 | maintainer line | |
| PRJNA884666 | SRX17729276 | 32.524899 | celery | anther | W99B-r2 | maintainer line | |
| PRJNA884666 | SRX17729277 | 26.093359 | celery | anther | W99B-r3 | maintainer line | |
| PRJNA884180 | SRX17743889 | 22.88475 | var. secalinum Yablochny | collenchyma | Col_S1_rep1-1 | ||
| PRJNA884180 | SRX17748056 | 24.046608 | var. secalinum Yablochny | collenchyma | Col_S1_rep3 | biological replicate 3 | |
| PRJNA884180 | SRX17748057 | 28.908321 | var. secalinum Yablochny | collenchyma | Col_S1_rep4 | biological replicate 4 | |
| PRJNA884180 | SRX17748678 | 35.077675 | var. secalinum Yablochny | parenchyma | Par_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17748679 | 24.218275 | var. secalinum Yablochny | parenchyma | Par_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17748680 | 28.40308 | var. secalinum Yablochny | parenchyma | Par_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17748681 | 35.109493 | var. secalinum Yablochny | parenchyma | Par_S1_rep4 | Biological replicate 4 | |
| PRJNA884180 | SRX17748898 | 28.377213 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17748899 | 31.452621 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17748900 | 32.664738 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17748901 | 27.526085 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep4 | Biological replicate 4 | |
| PRJNA884180 | SRX17749129 | 36.504894 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17749130 | 34.105659 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17749131 | 34.947491 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17749132 | 42.858315 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep4 | Biological replicate 4 | |
| PRJNA1124269 | SRX24936411 | 7.973547 | leaf | CK1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936412 | 11.14661 | leaf | CK2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936413 | 9.18994 | leaf | CK3 | replicate=biological replicate3 | ||
| PRJNA1124269 | SRX24936414 | 16.589651 | leaf | D1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936415 | 14.868921 | leaf | D2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936416 | 15.88265 | leaf | D3 | replicate=biological replicate3 | ||
| PRJNA1124269 | SRX24936417 | 12.159924 | leaf | MD1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936418 | 8.50048 | leaf | MD2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936419 | 11.203484 | leaf | MD3 | replicate=biological replicate3 | ||
| PRJNA387092 | SRX2833309 | 14.305757 | shanghaihuangxin | leaf | leaves between 0.5 and 1 cm in breadth, folded; | stage 2 | |
| PRJNA387092 | SRX2833321 | 12.134646 | shanghaihuangxin | leaf | leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion | stage 5 | |
| PRJNA387092 | SRX2833323 | 10.354248 | shanghaihuangxin | leaf | leaves >3 cm, unfolded, with clearstem extension | stage 7 | |
| PRJNA543957 | SRX5879598 | 33.668549 | Zhangzhou lvqing | stem | Se3 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879599 | 31.841438 | Zhangzhou lvqing | stem | Se2 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879600 | 47.049217 | Zhangzhou lvqing | stem | Mock2 | mock | |
| PRJNA543957 | SRX5879601 | 45.677189 | Zhangzhou lvqing | stem | Mock1 | mock | |
| PRJNA543957 | SRX5879602 | 32.994289 | Zhangzhou lvqing | stem | Se1 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879603 | 47.425526 | Zhangzhou lvqing | stem | Mock3 | mock | |
| PRJNA609149 | SRX7815917 | 24.52075 | Jinnan Shiqin | flower bud | early flower bud | early flower bud | |
| PRJNA609149 | SRX7815918 | 36.282604 | Jinnan Shiqin | flower bud | middle flower bud | middle flower bud | |
| PRJNA609149 | SRX7815919 | 28.132809 | Jinnan Shiqin | flower bud | early flowering period | early flowering period |
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg10642, jg11954, jg11955 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_6184, gene_788 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah007213, Ah024945 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_1g013090 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg19015, Sbi_jg37444 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg5282 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00015213 |
| Amaranthaceae | Suaeda glauca | 8 | Sgl22272, Sgl22302, Sgl27543, Sgl35693, Sgl64156, Sgl68610 ... |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000013990, gene:ENSEOMG00000015889 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1AG0017100, CQ.Regalona.r1.1BG0008530 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30045640 |
| Apiaceae | Apium graveolens | 1 | Ag8G01231 |
| Arecaceae | Cocos nucifera | 2 | COCNU_06G014780, COCNU_08G001180 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103714434, gene-LOC103722455 |
| Asparagaceae | Asparagus officinalis | 7 | AsparagusV1_03.1050.V1.1, AsparagusV1_03.2867.V1.1 ... |
| Asteraceae | Flaveria trinervia | 5 | Ftri16G19675, Ftri18G00462, Ftri18G02732, Ftri1G31202 ... |
| Brassicaceae | Arabidopsis thaliana | 2 | AT4G11800.1, AT4G23000.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10024304m.g.v1.0, Thhalv10028387m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp6g05650.v2.2, Sp7g21090.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB02g080170.2N, BniB05g057460.2N, BniB08g049690.2N |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq03G2304, Ceq03G2305 |
| Casuarinaceae | Casuarina glauca | 3 | Cgl03G2442, Cgl03G2443, Cgl03G2444 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno09g03760 |
| Dunaliellaceae | Dunaliella salina | 3 | Dusal.0003s00001.v1.0, Dusal.0003s00002.v1.0 ... |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate05g26680 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-12427, nbisL1-mrna-1277 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG06.466 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00027660 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb7G32730 |
| Poaceae | Echinochloa crus-galli | 6 | AH03.1068, AH03.32, BH03.1234, BH03.33, CH03.1366, CH03.41 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_6AG0525810, gene-QOZ80_6BG0479580 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0157290.1, HORVU.MOREX.r3.5HG0506790.1 |
| Poaceae | Oryza coarctata | 4 | Oco13G000240, Oco13G001050, Oco14G000240, Oco14G001120 |
| Poaceae | Oryza sativa | 2 | LOC_Os07g01540.1, LOC_Os07g04210.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G003100, gene-BS78_10G195500 |
| Poaceae | Puccinellia tenuiflora | 4 | Pt_Chr0303291, Pt_Chr0501193, Pt_Chr0700217, Pt_Chr0700405 |
| Poaceae | Sporobolus alterniflorus | 5 | Chr14G008680, Chr21G008920, Chr24G002660, Chr28G000240 ... |
| Poaceae | Thinopyrum elongatum | 5 | Tel2E01G481100, Tel5E01G584700, Tel5E01G585200 ... |
| Poaceae | Triticum dicoccoides | 5 | gene_TRIDC2AG036650, gene_TRIDC2BG041260 ... |
| Poaceae | Triticum aestivum | 8 | TraesCS2A02G258900.3, TraesCS2B02G284400.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb096290_P002, Zm00001eb298290_P001 |
| Poaceae | Zoysia japonica | 4 | nbis-gene-50692, nbis-gene-50693, nbis-gene-50695 ... |
| Poaceae | Zoysia macrostachya | 1 | Zma_g29873 |
| Portulacaceae | Portulaca oleracea | 7 | evm.TU.LG01.742, evm.TU.LG01.967, evm.TU.LG04.1220 ... |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc04g16730 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_7_RagTag.490 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-19130 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-10953 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-13002 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000002l.517 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00011672 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-8721 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-20024 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132604109, gene-LOC132627901 |
| Solanaceae | Solanum chilense | 2 | SOLCI003184100, SOLCI007325900 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107007496, gene-LOC107015628 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_6973 |
| Tamaricaceae | Tamarix chinensis | 1 | TC10G2169 |
| Zosteraceae | Zostera marina | 1 | Zosma06g04710.v3.1 |