halophFGD

Basic Information

Locus ID: Ag8G00613

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: BTB POZ domain-containing protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr8	30837544	30847805	+	Ag8G00613

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.89	32,569.37 Da	42.86	78.43	-0.41

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID

Best hit

Source	Best Hit ID	Description
TAIR	AT3G61600.1	POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1
RefSeq	XP_007040412.1	PREDICTED: BTB/POZ domain-containing protein POB1 [Theobroma cacao]
Swiss-Prot	Q9FPW6	BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2
TrEMBL	A0A7J8XSQ9	BACK domain-containing protein OS=Gossypium aridum OX=34290 GN=Goari_007464 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	8.189277	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	7.561837	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	10.081429	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	9.849336	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	9.379304	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	7.676067	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	5.539248	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	7.081188	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	7.556231	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	7.009631	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	8.96434	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	10.091015	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	6.067217	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	7.791762	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	4.37636	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	4.847929	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	7.528956	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	3.576038	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	2.51833	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	7.646098	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	3.407694	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	7.322111	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	8.743192	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	11.668106	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	8.224289	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	2.936655	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	6.903111	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	4.215151	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	5.16723	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	0.588183		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	0.311355		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	0.78896		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	0.842627		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	7.704611		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	0		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	0.295023		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	0.80453		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	0.455712		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	0.561274	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	0	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	0.579253	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	10.793345	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	12.521202	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	2.18087	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	3.485496	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	7.023689	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	4.380723	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	8.393401	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	9.88377	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	9.637094	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	5	jg26897, jg29603, jg4751, jg5166, jg7673
Aizoaceae	Mesembryanthemum crystallinum	2	gene_1663, gene_1786
Amaranthaceae	Atriplex hortensis	2	Ah004517, Ah022908
Amaranthaceae	Beta vulgaris	2	BVRB_1g003710, BVRB_5g099550
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg23973, Sbi_jg4022, Sbi_jg49225, Sbi_jg7802
Amaranthaceae	Salicornia europaea	2	Seu_jg12231, Seu_jg6014
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00000528, GOSA_00001103
Amaranthaceae	Suaeda glauca	2	Sgl10986, Sgl16396
Amaranthaceae	Chenopodium album	6	gene:ENSEOMG00000004194, gene:ENSEOMG00000014904 ... gene:ENSEOMG00000023873, gene:ENSEOMG00000024863, gene:ENSEOMG00000035143, gene:ENSEOMG00000046938
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.1AG0001620, CQ.Regalona.r1.2BG0025670 ... CQ.Regalona.r1.5AG0006390, CQ.Regalona.r1.5BG0006710
Anacardiaceae	Pistacia vera	2	pistato.v30005270, pistato.v30135020
Apiaceae	Apium graveolens	7	Ag5G01011, Ag6G00106, Ag6G01562, Ag8G00607, Ag8G00608 ... Ag8G00613, Ag8G00614
Arecaceae	Cocos nucifera	3	COCNU_02G003450, COCNU_03G012650, COCNU_06G003110
Arecaceae	Phoenix dactylifera	3	gene-LOC103710040, gene-LOC103710861, gene-LOC103713297
Asparagaceae	Asparagus officinalis	2	AsparagusV1_01.321.V1.1, AsparagusV1_05.2703.V1.1
Asteraceae	Flaveria trinervia	3	Ftri11G28852, Ftri15G25238, Ftri3G07972
Brassicaceae	Arabidopsis thaliana	3	AT2G46260.1, AT3G61600.1, AT4G01160.1
Brassicaceae	Eutrema salsugineum	3	Thhalv10001385m.g.v1.0, Thhalv10005840m.g.v1.0 ... Thhalv10028626m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp4g28310.v2.2, Sp5g01810.v2.2, Sp6g00950.v2.2
Brassicaceae	Brassica nigra	7	BniB06g053090.2N, BniB08g030050.2N, BniB08g041400.2N ... BniB08g041420.2N, BniB08g041440.2N, BniB08g075730.2N, BniS06172g080.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq02G1216, Ceq02G1217, Ceq03G0236
Casuarinaceae	Casuarina glauca	3	Cgl02G1256, Cgl02G1257, Cgl03G0282
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno02g12860, gene.Cymno02g12870
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate03g17470, gene.Thate09g15300
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-9521
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG04.766, evm.TU.LG10.1486
Plantaginaceae	Plantago ovata	2	Pov_00005308, Pov_00016644
Plumbaginaceae	Limonium bicolor	3	Lb1G03587, Lb1G03589, Lb1G03590
Poaceae	Echinochloa crus-galli	4	AH06.1786, AH07.1136, BH06.1663, BH07.1212
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_2AG0108370, gene-QOZ80_2BG0162030 ... gene-QOZ80_6AG0530390, gene-QOZ80_6BG0484190
Poaceae	Hordeum vulgare	5	HORVU.MOREX.r3.5HG0529260.1, HORVU.MOREX.r3.5HG0529280.1 ... HORVU.MOREX.r3.5HG0529310.1, HORVU.MOREX.r3.7HG0710300.1, HORVU.MOREX.r3.7HG0710320.1
Poaceae	Lolium multiflorum	7	gene-QYE76_016707, gene-QYE76_022385, gene-QYE76_022396 ... gene-QYE76_034019, gene-QYE76_034506, gene-QYE76_060474, gene-QYE76_061020
Poaceae	Oryza coarctata	4	Oco03G007150, Oco04G007470, Oco11G010080, Oco12G010020
Poaceae	Oryza sativa	3	LOC_Os02g16000.1, LOC_Os06g31090.1, LOC_Os06g31100.1
Poaceae	Paspalum vaginatum	2	gene-BS78_04G111800, gene-BS78_10G143800
Poaceae	Puccinellia tenuiflora	2	Pt_Chr0400107, Pt_Chr0400116
Poaceae	Sporobolus alterniflorus	6	Chr06G031860, Chr10G013030, Chr11G009230, Chr14G011390 ... Chr15G023090, Chr21G011540
Poaceae	Thinopyrum elongatum	4	Tel5E01G788300, Tel5E01G789900, Tel7E01G578100 ... Tel7E01G578200
Poaceae	Triticum dicoccoides	6	gene_TRIDC4AG054050, gene_TRIDC5AG052490 ... gene_TRIDC5BG076270, gene_TRIDC6BG050000, gene_TRIDC7AG048050, gene_TRIDC7BG039370
Poaceae	Triticum aestivum	7	TraesCS5B02G510800.2, TraesCS7A02G343900.3 ... TraesCS7A02G344000.1, TraesCS7B02G239100.1, TraesCS7B02G239200.6, TraesCS7D02G335600.1, TraesCS7D02G335700.3
Poaceae	Zea mays	3	Zm00001eb203840_P001, Zm00001eb237920_P001 ... Zm00001eb278060_P001
Poaceae	Zoysia japonica	1	nbis-gene-47879
Poaceae	Zoysia macrostachya	3	Zma_g12550, Zma_g30109, Zma_g32299
Portulacaceae	Portulaca oleracea	6	evm.TU.LG04.2210, evm.TU.LG06.96, evm.TU.LG10.434 ... evm.TU.LG17.430, evm.TU.LG19.1240, evm.TU.LG24.1250
Posidoniaceae	Posidonia oceanica	2	gene.Posoc08g14130, gene.Posoc09g08400
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.Scaffold_14_RagTag.137, evm.TU.Scaffold_5_RagTag.583 ... evm.TU.Scaffold_9_RagTag.567
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-10769, nbisL1-mrna-18271, nbisL1-mrna-21685
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-20591, nbisL1-mrna-2878, nbisL1-mrna-6097
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-10210, nbisL1-mrna-7369, nbisL1-mrna-8594
Rhizophoraceae	Kandelia candel	3	evm.TU.utg000003l.230, evm.TU.utg000006l.442 ... evm.TU.utg000007l.311
Rhizophoraceae	Kandelia obovata	3	Maker00013939, Maker00017552, Maker00018476
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-10258, nbisL1-mrna-15992, nbisL1-mrna-1727
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-10957, nbisL1-mrna-19586, nbisL1-mrna-7231
Salicaceae	Populus euphratica	3	populus_peu03639, populus_peu27609, populus_peu31601
Solanaceae	Lycium barbarum	5	gene-LOC132603821, gene-LOC132632522, gene-LOC132634828 ... gene-LOC132634829, gene-LOC132645493
Solanaceae	Solanum chilense	4	SOLCI001514600, SOLCI002642900, SOLCI003519000 ... SOLCI005351500
Solanaceae	Solanum pennellii	4	gene-LOC107002594, gene-LOC107005428, gene-LOC107027487 ... gene-LOC107028222
Tamaricaceae	Reaumuria soongarica	3	STRG.23374_chr05_-, STRG.28952_chr11_-, STRG.9727_chr06_-
Tamaricaceae	Tamarix chinensis	4	TC01G3159, TC03G2165, TC06G0172, TC09G2290
Zosteraceae	Zostera marina	4	Zosma01g08660.v3.1, Zosma05g04960.v3.1, Zosma06g24200.v3.1 ... Zosma06g24290.v3.1