halophFGD

Basic Information

Locus ID: Ag8G00602

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: Belongs to the glucose-6-phosphate 1-epimerase family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr8	28186635	28188005	-	Ag8G00602

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.89	15,709.57 Da	28.98	79.57	-0.47

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF01263	Aldose 1-epimerase	24	137	2.9E-22	IPR008183
SUPERFAMILY	SSF74650	Galactose mutarotase-like	19	105	3.85E-23	IPR011013
Gene3D	G3DSA:2.70.98.10	-	3	139	1.4E-34	IPR014718

Gene Ontology

Biological Process:

GO:0005975 (carbohydrate metabolic process)

Molecular Function:

GO:0003824 (catalytic activity) GO:0016853 (isomerase activity) GO:0030246 (carbohydrate binding)

KEGG Pathway

KO Term:

K01792 (glucose-6-phosphate 1-epimerase [EC:5.1.3.15])

Pathway:

ko00010 (Glycolysis / Gluconeogenesis) map00010 (Glycolysis / Gluconeogenesis) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites) ko01120 (Microbial metabolism in diverse environments) map01120 (Microbial metabolism in diverse environments)

Reaction:

R02739 (alpha-D-Glucose 6-phosphate <=> beta-D-Glucose 6-phosphate)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G61610.1	Galactose mutarotase-like superfamily protein.
RefSeq	XP_017223042.1	PREDICTED: putative glucose-6-phosphate 1-epimerase [Daucus carota subsp. sativus]
Swiss-Prot	Q40784	Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris OX=35872 PE=2 SV=1
TrEMBL	A0A175YM96	glucose-6-phosphate 1-epimerase OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_027734 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	1.160378	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	0.788416	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	0.148096	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	0.780476	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	0.465236	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	0	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	0	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	0.370464	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	2.489405	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	0.969424	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	0.542797	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	4.043468	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	3.124722	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	2.347538	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	2.057003	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	0.535025	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	0.161923	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	2.606876	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	1.572959	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	2.764915	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	1.27146	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	0	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	0	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	0	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	0	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	2.027079	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	2.112312	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	1.104456	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	1.763506	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	1.325498		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	1.447157		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	1.889193		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	11.91096		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	5.36836		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	8.154427		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	2.975874		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	0		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	0.564584		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	5.029344	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	8.824594	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	4.370525	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	0.247382	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	0.237797	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	0.906419	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	1.233316	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	0	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	0.267493	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	0.895862	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	0	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	0	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	9	jg17764, jg19863, jg23529, jg26905, jg29420, jg30465, jg4108 ... jg37042, jg40398
Aizoaceae	Mesembryanthemum crystallinum	4	gene_10802, gene_1658, gene_17494, gene_1784
Amaranthaceae	Atriplex hortensis	4	Ah004506, Ah014756, Ah022899, Ah037209
Amaranthaceae	Beta vulgaris	4	BVRB_1g003620, BVRB_5g099470, BVRB_6g143920, BVRB_8g198340
Amaranthaceae	Salicornia bigelovii	8	Sbi_jg23985, Sbi_jg25156, Sbi_jg4010, Sbi_jg42040 ... Sbi_jg48097, Sbi_jg49217, Sbi_jg7809, Sbi_jg8998
Amaranthaceae	Salicornia europaea	4	Seu_jg12219, Seu_jg19594, Seu_jg27458, Seu_jg6023
Amaranthaceae	Suaeda aralocaspica	4	GOSA_00000536, GOSA_00001097, GOSA_00007644, GOSA_00008876
Amaranthaceae	Suaeda glauca	9	Sgl10977, Sgl11083, Sgl16376, Sgl31622, Sgl36933, Sgl42434 ... Sgl47163, Sgl52148, Sgl57421
Amaranthaceae	Chenopodium album	13	gene:ENSEOMG00000002257, gene:ENSEOMG00000002330 ... gene:ENSEOMG00000005453, gene:ENSEOMG00000011572, gene:ENSEOMG00000013687, gene:ENSEOMG00000022220, gene:ENSEOMG00000025677, gene:ENSEOMG00000026701, gene:ENSEOMG00000033199, gene:ENSEOMG00000034610, gene:ENSEOMG00000035617, gene:ENSEOMG00000047870, gene:ENSEOMG00000050224
Amaranthaceae	Chenopodium quinoa	6	CQ.Regalona.r1.2BG0025770, CQ.Regalona.r1.5AG0006350 ... CQ.Regalona.r1.5BG0006630, CQ.Regalona.r1.6AG0011050, CQ.Regalona.r1.8AG0018460, CQ.Regalona.r1.8BG0023920
Anacardiaceae	Pistacia vera	6	pistato.v30005360, pistato.v30023140, pistato.v30130190 ... pistato.v30130800, pistato.v30134940, pistato.v30263090
Apiaceae	Apium graveolens	5	Ag11G05047, Ag3G00877, Ag4G00759, Ag4G02242, Ag8G00602
Arecaceae	Cocos nucifera	6	COCNU_01G008410, COCNU_02G018700, COCNU_06G003200 ... COCNU_11G009560, COCNU_11G012890, COCNU_14G001820
Arecaceae	Phoenix dactylifera	3	gene-LOC103701526, gene-LOC103707075, gene-LOC103708356
Asparagaceae	Asparagus officinalis	4	AsparagusV1_01.54.V1.1, AsparagusV1_05.2441.V1.1 ... AsparagusV1_05.2716.V1.1, AsparagusV1_05.3499.V1.1
Asteraceae	Flaveria trinervia	10	Ftri11G23872, Ftri13G04076, Ftri14G27108, Ftri15G03410 ... Ftri15G08299, Ftri15G32552, Ftri18G05830, Ftri3G26990, Ftri4G01046, Ftri8G09870
Brassicaceae	Arabidopsis thaliana	6	AT3G01590.2, AT3G61610.1, AT4G23730.1, AT4G25900.1 ... AT5G14500.1, AT5G57330.1
Brassicaceae	Eutrema salsugineum	7	Thhalv10006104m.g.v1.0, Thhalv10014164m.g.v1.0 ... Thhalv10014200m.g.v1.0, Thhalv10021199m.g.v1.0, Thhalv10025755m.g.v1.0, Thhalv10025817m.g.v1.0, Thhalv10026020m.g.v1.0
Brassicaceae	Schrenkiella parvula	6	Sp3g00460.v2.2, Sp5g01800.v2.2, Sp6g19050.v2.2 ... Sp6g29510.v2.2, Sp7g21670.v2.2, Sp7g23920.v2.2
Brassicaceae	Brassica nigra	13	BniB02g036680.2N, BniB02g080720.2N, BniB03g012620.2N ... BniB05g001850.2N, BniB05g011480.2N, BniB05g013440.2N, BniB05g036900.2N, BniB06g053080.2N, BniB07g035180.2N, BniB08g006990.2N, BniB08g013860.2N, BniB08g075750.2N, BniB08g075880.2N
Casuarinaceae	Casuarina equisetifolia	5	Ceq02G1223, Ceq02G1896, Ceq03G0219, Ceq03G1110, Ceq05G0650
Casuarinaceae	Casuarina glauca	5	Cgl02G1263, Cgl02G1973, Cgl03G0260, Cgl03G1202, Cgl05G0663
Cymodoceaceae	Cymodocea nodosa	6	gene.Cymno02g12790, gene.Cymno04g01270, gene.Cymno06g06760 ... gene.Cymno07g04830, gene.Cymno07g12540, gene.Cymno08g00890
Dunaliellaceae	Dunaliella salina	1	Dusal.0115s00012.v1.0
Hydrocharitaceae	Thalassia testudinum	6	gene.Thate02g25640, gene.Thate03g22510, gene.Thate04g22680 ... gene.Thate05g05800, gene.Thate07g16140, gene.Thate09g00630
Malvaceae	Hibiscus hamabo Siebold & Zucc.	7	nbisL1-mrna-11219, nbisL1-mrna-2269, nbisL1-mrna-2448 ... nbisL1-mrna-2461, nbisL1-mrna-3364, nbisL1-mrna-4654, nbisL1-mrna-846
Nitrariaceae	Nitraria sibirica	5	evm.TU.LG01.702, evm.TU.LG04.760, evm.TU.LG05.282 ... evm.TU.LG07.64, evm.TU.LG10.1491
Plantaginaceae	Plantago ovata	3	Pov_00017331, Pov_00024178, Pov_00028419
Plumbaginaceae	Limonium bicolor	3	Lb2G11199, Lb2G11201, Lb3G17122
Poaceae	Echinochloa crus-galli	15	AH02.2597, AH05.1339, AH07.549, AH08.802, AH09.2203 ... BH02.2698, BH05.1510, BH07.675, BH08.847, BH09.2374, CH02.3840, CH05.1710, CH07.555, CH08.935, CH09.2522
Poaceae	Eleusine coracana subsp. coracana	10	gene-QOZ80_1AG0027240, gene-QOZ80_1BG0077440 ... gene-QOZ80_2AG0103460, gene-QOZ80_2BG0156770, gene-QOZ80_4AG0300970, gene-QOZ80_4BG0331710, gene-QOZ80_5AG0362590, gene-QOZ80_5BG0410760, gene-QOZ80_8AG0623500, gene-QOZ80_8BG0651730
Poaceae	Hordeum vulgare	5	HORVU.MOREX.r3.1HG0090330.1, HORVU.MOREX.r3.2HG0193070.1 ... HORVU.MOREX.r3.2HG0202520.1, HORVU.MOREX.r3.6HG0570230.1, HORVU.MOREX.r3.7HG0694820.1
Poaceae	Lolium multiflorum	5	gene-QYE76_020917, gene-QYE76_021009, gene-QYE76_032393 ... gene-QYE76_046126, gene-QYE76_047045
Poaceae	Oryza coarctata	11	Oco01G016250, Oco02G016480, Oco03G003840, Oco04G003770 ... Oco07G015140, Oco07G017960, Oco08G014640, Oco08G017330, Oco09G017130, Oco15G004790, Oco16G004490
Poaceae	Oryza sativa	6	LOC_Os01g46950.1, LOC_Os02g08030.1, LOC_Os04g51390.1 ... LOC_Os04g56290.1, LOC_Os05g49430.1, LOC_Os08g14330.2
Poaceae	Paspalum vaginatum	5	gene-BS78_03G217600, gene-BS78_04G056900 ... gene-BS78_06G266200, gene-BS78_07G093400, gene-BS78_09G241300
Poaceae	Puccinellia tenuiflora	7	Pt_Chr0202364, Pt_Chr0300545, Pt_Chr0300567, Pt_Chr0301411 ... Pt_Chr0402618, Pt_Chr0502948, Pt_Chr0505610
Poaceae	Sporobolus alterniflorus	13	Chr02G013830, Chr03G012190, Chr08G012470, Chr0G027820 ... Chr16G003170, Chr17G002750, Chr18G016610, Chr20G009600, Chr22G000860, Chr25G001600, Chr26G017300, Chr29G009300, Chr30G001600
Poaceae	Thinopyrum elongatum	5	Tel1E01G677700, Tel2E01G738700, Tel2E01G848400 ... Tel6E01G312700, Tel7E01G496900
Poaceae	Triticum dicoccoides	10	gene_TRIDC1AG060350, gene_TRIDC1BG069110 ... gene_TRIDC2AG062850, gene_TRIDC2AG070530, gene_TRIDC2BG066560, gene_TRIDC2BG076260, gene_TRIDC6AG021140, gene_TRIDC6BG027030, gene_TRIDC7AG040040, gene_TRIDC7BG030250
Poaceae	Triticum aestivum	15	TraesCS1A02G409900.1, TraesCS1B02G439900.1 ... TraesCS1D02G417300.1, TraesCS2A02G437100.1, TraesCS2A02G501600.1, TraesCS2B02G456200.2, TraesCS2B02G529800.1, TraesCS2D02G432900.1, TraesCS2D02G502100.1, TraesCS6A02G152400.1, TraesCS6B02G180500.1, TraesCS6D02G142200.1, TraesCS7A02G288900.1, TraesCS7B02G185300.2, TraesCS7D02G292700.1
Poaceae	Zea mays	6	Zm00001eb067700_P001, Zm00001eb157870_P002 ... Zm00001eb178250_P001, Zm00001eb206840_P001, Zm00001eb296350_P001, Zm00001eb414550_P001
Poaceae	Zoysia japonica	5	nbis-gene-13617, nbis-gene-23081, nbis-gene-24814 ... nbis-gene-25972, nbis-gene-53679
Poaceae	Zoysia macrostachya	9	Zma_g10795, Zma_g15044, Zma_g20598, Zma_g21920, Zma_g22131 ... Zma_g22682, Zma_g23820, Zma_g27410, Zma_g28830
Portulacaceae	Portulaca oleracea	10	evm.TU.LG02.2725, evm.TU.LG04.2204, evm.TU.LG04.3306 ... evm.TU.LG06.102, evm.TU.LG10.428, evm.TU.LG16.294, evm.TU.LG17.425, evm.TU.LG19.1237, evm.TU.LG23.935, evm.TU.LG24.1253
Posidoniaceae	Posidonia oceanica	4	gene.Posoc01g06820, gene.Posoc03g14570, gene.Posoc05g02650 ... gene.Posoc08g14060
Rhizophoraceae	Bruguiera sexangula	6	evm.TU.Scaffold_10_RagTag.285, evm.TU.Scaffold_14_RagTag.133 ... evm.TU.Scaffold_16_RagTag.111, evm.TU.Scaffold_3_RagTag.1935, evm.TU.Scaffold_4_RagTag.2032, evm.TU.Scaffold_9_RagTag.574
Rhizophoraceae	Carallia pectinifolia	6	nbisL1-mrna-13282, nbisL1-mrna-21692, nbisL1-mrna-22356 ... nbisL1-mrna-2413, nbisL1-mrna-25457, nbisL1-mrna-2562
Rhizophoraceae	Ceriops tagal	6	nbisL1-mrna-12605, nbisL1-mrna-2883, nbisL1-mrna-3684 ... nbisL1-mrna-4395, nbisL1-mrna-6777, nbisL1-mrna-7821
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-20371, nbisL1-mrna-3099, nbisL1-mrna-7375 ... nbisL1-mrna-8599
Rhizophoraceae	Kandelia candel	6	evm.TU.utg000003l.226, evm.TU.utg000007l.315 ... evm.TU.utg000008l.1180, evm.TU.utg000019l.57, evm.TU.utg000022l.425, evm.TU.utg000033l.190
Rhizophoraceae	Kandelia obovata	6	Maker00000166, Maker00001698, Maker00014237, Maker00014683 ... Maker00017734, Maker00018456
Rhizophoraceae	Rhizophora apiculata	6	nbisL1-mrna-12027, nbisL1-mrna-14251, nbisL1-mrna-15988 ... nbisL1-mrna-16579, nbisL1-mrna-1723, nbisL1-mrna-3566
Rhizophoraceae	Rhizophora mangle	6	nbisL1-mrna-10961, nbisL1-mrna-14670, nbisL1-mrna-19580 ... nbisL1-mrna-20973, nbisL1-mrna-5466, nbisL1-mrna-6735
Salicaceae	Populus euphratica	9	populus_peu01108, populus_peu03647, populus_peu04154 ... populus_peu05287, populus_peu05290, populus_peu05360, populus_peu05414, populus_peu31596, populus_peu34983
Solanaceae	Lycium barbarum	4	gene-LOC132603372, gene-LOC132621580, gene-LOC132634823 ... gene-LOC132645490
Solanaceae	Solanum chilense	5	SOLCI002687600, SOLCI003540000, SOLCI003906500 ... SOLCI004254000, SOLCI005351200
Solanaceae	Solanum pennellii	5	gene-LOC107007926, gene-LOC107008938, gene-LOC107026328 ... gene-LOC107028741, gene-LOC107032365
Tamaricaceae	Reaumuria soongarica	6	STRG.14720_chr08_+, STRG.23275_chr05_+, STRG.23368_chr05_- ... gene_1385, gene_15202, gene_928
Tamaricaceae	Tamarix chinensis	7	TC01G3563, TC01G4242, TC03G1004, TC03G2157, TC09G2300 ... TC10G0828, TC12G0488
Zosteraceae	Zostera marina	6	Zosma02g11490.v3.1, Zosma02g22810.v3.1, Zosma03g00510.v3.1 ... Zosma03g18980.v3.1, Zosma04g00930.v3.1, Zosma04g06810.v3.1